PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Orthologous Group |

Basic Information? help Back to Top

TF ID

HL.SW.v1.0.G044391.1

Organism

Humulus lupulus

Taxonomic ID

3486

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus

Family

BES1

Protein Properties

Length: 255aa MW: 26649.3 Da PI: 4.7336

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
HL.SW.v1.0.G044391.1	genome	HOPBASE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	35.3	4e-11	2	77	72	149
DUF822 72 gskpleeaeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa......asllpvlsvlslvsss 149 g+kp+++++++g s+sasp+ss+q +sp++sy++sp++ssfpsp+s+ + + ++ +sl+p+l++l++ sss HL.SW.v1.0.G044391.1 2 GCKPMDRMDIMGGSTSASPCSSYQ--------PSPCASYNPSPATSSFPSPVSSHYTANVNSnnnadpNSLIPWLKTLTSGSSS 77 89********************........888888888888888888877665444333356777******99887666 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	9.9E-13	2	71	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence Send to blast
IGCKPMDRMD IMGGSTSASP CSSYQPSPCA SYNPSPATSS FPSPVSSHYT ANVNSNNNAD 60 PNSLIPWLKT LTSGSSSATS KFPHHLFIDS GSISAPVTPP LSSPTCRTPR NKNEWDDPMV 120 ASQNNPFQPS SNPQSPGRQV LPDSNWLAGI QSGPSSPTFS LVSRNPFGFK DEALSNGGSR 180 MWTPGQSGTC SPAIAAGLDN TSDIPMSDGN IAGAEFAFGS NTTGLVKPWK GERIEECVSD 240 DLELTLGNAT TSTW*

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015875614.1	1e-119	BES1/BZR1 homolog protein 4 isoform X3
Swissprot	Q9ZV88	2e-88	BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBL	A0A2P5FDE3	1e-121	A0A2P5FDE3_TREOI; BES1/BZR1 transcription factor
STRING	XP_009351745.1	1e-114	(Pyrus x bretschneideri)
STRING	XP_008371512.1	1e-114	(Malus domestica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2661	33	75

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	7e-82	BES1/BZR1 homolog 4