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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | HL.SW.v1.0.G044254.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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Family | bZIP | ||||||||
Protein Properties | Length: 448aa MW: 47918.9 Da PI: 9.8633 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 47.2 | 4.7e-15 | 349 | 400 | 5 | 56 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L+++N++Lkk+ ee ++ HL.SW.v1.0.G044254.1 349 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEKNEELKKKQEEFVEMQ 400 79*****************************************999887765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.3E-12 | 345 | 407 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.197 | 347 | 396 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 8.75E-11 | 349 | 398 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.0E-14 | 349 | 396 | No hit | No description |
Pfam | PF00170 | 6.7E-13 | 349 | 401 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 5.97E-20 | 349 | 380 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 352 | 367 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009651 | Biological Process | response to salt stress | ||||
GO:0009738 | Biological Process | abscisic acid-activated signaling pathway | ||||
GO:0010255 | Biological Process | glucose mediated signaling pathway | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0000976 | Molecular Function | transcription regulatory region sequence-specific DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 448 aa Download sequence Send to blast |
MGSNMNFKGT GNDPSANGGG GRPPGNNQLV RQSSIYSLTF DEFQSTVGGI GKDFGSMNMD 60 ELLKNIWSAE EIQSMASVGT STTGQTGVGA PLQKQGSLTL PRTLSQKTVD EVWRDLSKDG 120 SGAAGPNLPQ RQQTLREMTL EEFLVRAGVV REDSQLAGKP SNNCGFFGDL SCSVNNDNSG 180 LGISFEQANR GATMVGNRIP ETNNQIPIQA ANLPLNVNGV RSNQQHLAQQ QHQQLAQQQI 240 FPKQPTVTYA SHLPLQTGGQ LGSPGVRGGI MGMTDQGLSN ALVQGGGMGM VGLGAGAITM 300 GTGSPANQIS SDGMKSNGDT SSVSPVPFVF NGGLRGRKCS GAVEKVVERR QRRMIKNRES 360 AARSRARKQA YTMELEAEVA KLKEKNEELK KKQEEFVEMQ KKQIFHALWL KYTTGNGDDK 420 PAARSKETVL EKNADWALVK CAAAVRM* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00186 | DAP | Transfer from AT1G45249 | Download |
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Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024930392.1 | 0.0 | bZIP transcription factor 23 isoform X2 | ||||
Swissprot | Q9M7Q4 | 1e-121 | AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5 | ||||
TrEMBL | W9SA09 | 0.0 | W9SA09_9ROSA; ABSCISIC ACID-INSENSITIVE 5-like protein 5 | ||||
STRING | XP_010112189.1 | 0.0 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1962 | 34 | 81 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G45249.1 | 1e-104 | abscisic acid responsive elements-binding factor 2 |
Publications ? help Back to Top | |||
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