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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
HL.SW.v1.0.G044093.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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| Family |
LBD |
| Protein Properties |
Length: 248aa MW: 27181.1 Da PI: 4.422 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| HL.SW.v1.0.G044093.1 | genome | HOPBASE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 120.9 | 6.9e-38 | 7 | 108 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqle 88
+C aCk+lrrkC+++C++apyf+ ++ +++fa+vhk+FGasnv+kll +lp + r+da+s++ +eA ar+rdP+yG+v+ i++lqqq++
HL.SW.v1.0.G044093.1 7 SCGACKFLRRKCSSECIFAPYFCYDEaANNFAAVHKVFGASNVSKLLLHLPLHCRSDAASTISFEAVARMRDPIYGCVAQIFALQQQVA 95
6***********************9878************************************************************* PP
DUF260 89 qlkaelallkeel 101
l++e++ l++++
HL.SW.v1.0.G044093.1 96 YLQEEIEILGNQI 108
*******998875 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 248 aa
Download sequence Send
to blast |
MTGFGSSCGA CKFLRRKCSS ECIFAPYFCY DEAANNFAAV HKVFGASNVS KLLLHLPLHC 60
RSDAASTISF EAVARMRDPI YGCVAQIFAL QQQVAYLQEE IEILGNQIAH NATTGFASCG 120
SSSEGTVNNS NTTHNNNLDY ASQLFSHDGV LNSQYYQNQQ EILLSQNQNS TGNSSNQVVD 180
GQMGFQLRQN PCGWGDENMV CNSLSDPLEK LFQGIEQESF GNNPWLDEIP NMENFIGPQS 240
GTETILW*
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