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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
HL.SW.v1.0.G042191.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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Family |
ERF |
Protein Properties |
Length: 189aa MW: 20814.8 Da PI: 10.5356 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
HL.SW.v1.0.G042191.1 | genome | HOPBASE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 65.8 | 8.4e-21 | 47 | 97 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s+++GVr ++ +gr++AeIrd ++ ++r +lg+f+taeeAa+a++ a+++l+g
HL.SW.v1.0.G042191.1 47 SHFRGVRKRP-WGRFAAEIRDpWK----KTRKWLGTFDTAEEAARAYDDAARSLRG 97
78********.**********883....5*************************99 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 189 aa
Download sequence Send
to blast |
MAVDTLRLRK NSLNSSAGAS AEPRPLAPSP PSPNESQQFR VPALKESHFR GVRKRPWGRF 60 AAEIRDPWKK TRKWLGTFDT AEEAARAYDD AARSLRGPKA KTNFGHGGLA GPIMTAAPPQ 120 SVVVGDCMQL WRQPVYLHSV TPSSAPARSE YKGYKLENVD VVVSEQEKTM GKEKKPFLFD 180 LNLPAPLF*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KT369544 | 1e-35 | KT369544.1 Prunus pseudocerasus AP2/EREBP family transcription factor-like protein 12 mRNA, complete cds. |