 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
HL.SW.v1.0.G041675.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 321aa MW: 37011.5 Da PI: 6.6771 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| HL.SW.v1.0.G041675.1 | genome | HOPBASE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 64.6 | 1.4e-20 | 51 | 104 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+++++++q+++Le++Fe+++++ e++++LA++lgL+ rqV +WFqNrRa++k
HL.SW.v1.0.G041675.1 51 KKRRLSSDQVKALERYFEMENKLEPERKAKLADELGLQPRQVAIWFQNRRARWK 104
45689************************************************9 PP
|
| 2 | HD-ZIP_I/II | 128.7 | 2.3e-41 | 51 | 142 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90
kkrrls++qvk+LE+ Fe+e+kLeperK++la eLglqprqva+WFqnrRAR+ktkqlEkdy+ Lk++yd+lk + e+L+k++e+L+++
HL.SW.v1.0.G041675.1 51 KKRRLSSDQVKALERYFEMENKLEPERKAKLADELGLQPRQVAIWFQNRRARWKTKQLEKDYNLLKSNYDSLKFSYEALQKQNETLTKK 139
9**************************************************************************************99 PP
HD-ZIP_I/II 91 lke 93
+++
HL.SW.v1.0.G041675.1 140 IRQ 142
986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 321 aa
Download sequence Send
to blast |
MKRFSSSESL GALVSISQPK ETNNNQGYSK EFQAMLDSLD QEDCGEEYTG KKRRLSSDQV 60
KALERYFEME NKLEPERKAK LADELGLQPR QVAIWFQNRR ARWKTKQLEK DYNLLKSNYD 120
SLKFSYEALQ KQNETLTKKI RQLNTKMSRQ SEESSQSVKE DHQSPISGHE SNGLDHSKTS 180
CDFQENNNNN NSNNNKGAEQ LLLLHHHHHH HHHETFGNYY AKSSKDGYSD SDSINGVTKE 240
DHNKPEYSLG PNGSSSSCSN TIQNWIQISD HNNYARAFPV KICQPQFMRM EDQTLFSSED 300
SCNFLSVDQA PTLHWYFPDQ *
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 98 | 106 | RRARWKTKQ |
