 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
HL.SW.v1.0.G041031.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
|
| Family |
WRKY |
| Protein Properties |
Length: 362aa MW: 39199.1 Da PI: 10.1525 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| HL.SW.v1.0.G041031.1 | genome | HOPBASE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 99.3 | 2.5e-31 | 289 | 346 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp+++++tYeg+Hnh+
HL.SW.v1.0.G041031.1 289 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPTMLIVTYEGDHNHT 346
99************************988****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0005516 | Molecular Function | calmodulin binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 362 aa
Download sequence Send
to blast |
MAVELMMAYG LDSFTSNMEE NSVKEAASAG IQSVEKFLRL ISQHDNYLHQ HQQVADVAVT 60
KFKRVISLLD RGRTGHARFR RSPSNPMSSS SSPSSSSSTP PPPPPQRQDG PGQDPSGSSS 120
PFQHNSNPKQ ELASAFKVYC PTPVLRLPPL PQNQNQVQSR QNHPMNSVVL APRNGSLEKK 180
DTVVSAATIN FSPSPCISGA NSFMSSLTGD TDSTVQPSFS SGFQLTSSTG RPPLSTSSFK 240
RKCNSVDAGA IRCGSSSGRC HCSKKRKSKV KRVVRVPAIS MKMADIPPDD YSWRKYGQKP 300
IKGSPHPRGY YKCSSVRGCP ARKHVERALD DPTMLIVTYE GDHNHTHSVT EATAALVLES 360
S*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: By salicylic acid and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
