PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID HL.SW.v1.0.G040134.1
Organism
Humulus lupulus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
Family bZIP
Protein Properties Length: 549aa    MW: 59435.5 Da    PI: 6.6604
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
HL.SW.v1.0.G040134.1genomeHOPBASEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.78.2e-11391449563
                           CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                           kr++r   NR +A rs +R+  +i eLe kv++L++e ++L  ++ +l+  +  l+s++
  HL.SW.v1.0.G040134.1 391 KRAKRILANRQSAARSKERRSRYISELEHKVQTLQTEATTLSAQVTKLQRDSVGLTSQN 449
                           9*********************************************9999888887776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-15387451IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.909389452IPR004827Basic-leucine zipper domain
PfamPF001703.6E-9391449IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.88E-10391442No hitNo description
Gene3DG3DSA:1.20.5.1708.2E-11391448No hitNo description
CDDcd147034.05E-22392441No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 549 aa     Download sequence    Send to blast
MEGTSETMQR PNNSAFGFGT SQMGILPLGQ LSPNLSPDGS KRPGIPPSHP NNPMIHSLPY  60
SKGAGVRSGN WQSTPQNTSP GPSHTRSLSQ PSFFSLDSLP PLSPSPHREP SHSSLSDPAS  120
NDVTMEENVV NSNSQSLPSP VNRGGAFRAG DSLPPRKGHR RSSSDILLGF SAMIQSSPQL  180
IPISSRGVFD GAVSGRENPN QLVKQEHNKD NGNNTANGME DKRSDGEVAD DLFSAYMNLE  240
NIDKVNSTGT EDKDFDSRAS GSKTNGCESS DNEVESSINA NPNSISGSSS GFANGKREGV  300
KRAAAGDIAP TSRHYRSLSM DSYMGSLQFD DESLKILPLG TGASLQSPNS LVDGNSTKFG  360
MEFGNGEFSA VELKKIMESE KLTEIALSDP KRAKRILANR QSAARSKERR SRYISELEHK  420
VQTLQTEATT LSAQVTKLQR DSVGLTSQNS ELKFRVQAME QQAQLKDALN EALSAEVQRL  480
KLTAAELSGE AHLSNCMAQQ LSINQQMYQM QHRQSVQLNL YQMQQQQQPN EMSSQPRNGK  540
VAEHESNQ*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010105258.10.0transcription factor RF2a
RefseqXP_024027168.10.0transcription factor RF2a
TrEMBLA0A2P5DBU60.0A0A2P5DBU6_PARAD; Basic-leucine zipper transcription factor
STRINGXP_010105258.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22723484
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-113bZIP family protein