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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
HL.SW.v1.0.G039304.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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Family |
GATA |
Protein Properties |
Length: 278aa MW: 30681.8 Da PI: 7.2231 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
HL.SW.v1.0.G039304.1 | genome | HOPBASE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 55.1 | 1e-17 | 176 | 210 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C++C + kTp+WR gp g+ktLCnaCG++y++ +l
HL.SW.v1.0.G039304.1 176 CTHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRL 210
*******************************9885 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009416 | Biological Process | response to light stimulus |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 278 aa
Download sequence Send
to blast |
MDHVYGSLPT HQQDCFGIDD LLDFSNNEDN QFLSSSSNSD VPHHHHYLPP LLPQTSASAH 60 FLNTPDFTSD LCVPSDDVAE LEWLSRFVDD SFYDLPTGEI PGALTYPNDA SFSGRARSKR 120 SRVPITGANT SWGSISTPPP ELESSSSIAA KTKSKREASP SNVNAASSAS GGARRCTHCA 180 SEKTPQWRTG PMGPKTLCNA CGVRYKSGRL VPEYRPAASP TFVLTQHSNS HRKVMELRRQ 240 KEMTRQPPLP QQQAEQEQHH PQQRGQFYSH HHGFQVC*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes. {ECO:0000269|PubMed:12139008}. |
UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes. {ECO:0000269|PubMed:12139008}. |