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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
HL.SW.v1.0.G038666.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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Family |
ERF |
Protein Properties |
Length: 206aa MW: 22727.2 Da PI: 5.0912 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
HL.SW.v1.0.G038666.1 | genome | HOPBASE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58.7 | 1.5e-18 | 19 | 68 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ykGVr +k +g+Wv+eIr p++ r r++lg+++tae+Aa+a +aa +l+g
HL.SW.v1.0.G038666.1 19 RYKGVRKRK-WGKWVSEIRLPNS---RERIWLGSYDTAEKAARAFDAALFCLRG 68
69****999.**********933...5*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 206 aa
Download sequence Send
to blast |
MVKQSPIEKN PESERSDLRY KGVRKRKWGK WVSEIRLPNS RERIWLGSYD TAEKAARAFD 60 AALFCLRGRT AKFNFPNSPP EIAGGRSLTP TEIQAAAARF ANSEAANGRH SGRTVPEIIQ 120 MESPSPSVSE GSGMAHLDSD VATNLSCMDL FSNLGTGNYA TEYGLFPGFD DLTGDFFSPP 180 LPTIDYGEDN SFDGYLHQDS FLWNF*
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KF678386 | 3e-45 | KF678386.1 Morus notabilis dehydration responsive element binding transcription factor (DREB5H) mRNA, complete cds. |