 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
HL.SW.v1.0.G037058.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
|
| Family |
Dof |
| Protein Properties |
Length: 262aa MW: 28477.8 Da PI: 8.4702 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| HL.SW.v1.0.G037058.1 | genome | HOPBASE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 125.3 | 1.9e-39 | 22 | 82 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
++++l+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknkk s
HL.SW.v1.0.G037058.1 22 PQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGTLRNVPVGGGSRKNKKPS 82
6899******************************************************865 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 262 aa
Download sequence Send
to blast |
MGSNNNNNNN DDNNGDQKRS RPQEQLNCPR CNSTNTKFCY YNNYSLTQPR YFCKTCRRYW 60
TEGGTLRNVP VGGGSRKNKK PSTTTATTTS APSNINTILS PQNLMLSYNS VQGGQDLNLG 120
FQSAATPAAK AEDDSRFGSD LHHHHPSSSG VNGSTRQLLM YPSGFPFQDE FKPSSLGGFS 180
SSNVDHGLGS RYNSPGHDYN RVVHQVQDHH DNNGGTILFP FGDLKQAVSN NGTEVIHDHQ 240
TKGQGNPTGY WTGLLGGGGS W*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | BT136873 | 7e-53 | BT136873.1 Lotus japonicus clone JCVI-FLLj-14C11 unknown mRNA. |
| GenBank | BT144333 | 7e-53 | BT144333.1 Lotus japonicus clone JCVI-FLLj-13E12 unknown mRNA. |
