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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
HL.SW.v1.0.G036454.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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Family |
ERF |
Protein Properties |
Length: 247aa MW: 27755.1 Da PI: 9.4565 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
HL.SW.v1.0.G036454.1 | genome | HOPBASE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 62.2 | 1.2e-19 | 132 | 181 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
y+GVr+++ +g+W+AeIrdp+ r +r++lg+f tae Aaka+++a+ +++g
HL.SW.v1.0.G036454.1 132 NYRGVRQRP-WGKWAAEIRDPR----RaARVWLGTFETAELAAKAYDRAAIEFRG 181
59*******.**********82....48************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 247 aa
Download sequence Send
to blast |
MSFPTFLRNV TVDEEHSIMV STLKYVICGE TDPGPTRPQR QVAQPLKSLQ IATSATNSTN 60 ESTLLMSFPD SDTCRVCKIN GCLGCNYFRS SNERAKTTTK TSPSSWSLSF ARTKASNDKN 120 NSGVVARKKK KNYRGVRQRP WGKWAAEIRD PRRAARVWLG TFETAELAAK AYDRAAIEFR 180 GSKAKLNFPM SEYENKNDDK CHNGLVTDTA VSNSQVGPQK NTSWENDSEF WDEVEGDWVR 240 MMNFHS*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
2gcc_A | 9e-25 | 129 | 190 | 2 | 64 | ATERF1 |
3gcc_A | 9e-25 | 129 | 190 | 2 | 64 | ATERF1 |