 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
HL.SW.v1.0.G034794.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
|
| Family |
WRKY |
| Protein Properties |
Length: 372aa MW: 41201.6 Da PI: 7.4986 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| HL.SW.v1.0.G034794.1 | genome | HOPBASE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 94 | 1.1e-29 | 215 | 274 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
++Dgy+WrKYGqK+ ++++ pr+Y++C++a +Cpvkkkv+rsaedp+++++tYegeH h+
HL.SW.v1.0.G034794.1 215 VKDGYQWRKYGQKVTRDNPSPRAYFKCSFApNCPVKKKVQRSAEDPSLLVVTYEGEHCHS 274
58***************************99***************************97 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 372 aa
Download sequence Send
to blast |
MESTWPKNSL DLNLNSFQHV IEVPEKELER DHSINFEGKF SVREVGTGDG DVDKNVLLTE 60
ELHRMSSENK KLTEMLSIVW KNYNNLQTKV RELMMTKNAG VSHAHGQNEL ASLTPRKRKA 120
GEEYSNVVNG LMSNMECCSS DEEYSYCRLP KEIKSKNAEV SHGQNELASL TPRKRKAGEE 180
YSNVVSGLIS NIMECCSSDE EYSCRLPKEI KSKLVKDGYQ WRKYGQKVTR DNPSPRAYFK 240
CSFAPNCPVK KKVQRSAEDP SLLVVTYEGE HCHSHISSSQ PSALMLPAIS ASMRSLPSTV 300
TLDLVRPAAA AAAGSTDSPR MAPLQGIDSP VLHQFLVQQM ASSLTRDPNF TAALATAISG 360
NLLDNTRVEK G*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1wj2_A | 2e-19 | 214 | 273 | 16 | 74 | Probable WRKY transcription factor 4 |
| 2lex_A | 2e-19 | 214 | 273 | 16 | 74 | Probable WRKY transcription factor 4 |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | GU984020 | 1e-36 | GU984020.1 Cucumis sativus WRKY protein (WRKY21) mRNA, complete cds. |
