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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
HL.SW.v1.0.G034700.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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Family |
ERF |
Protein Properties |
Length: 334aa MW: 36756.7 Da PI: 5.4579 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
HL.SW.v1.0.G034700.1 | genome | HOPBASE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 59.7 | 7e-19 | 22 | 70 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ GVr+++ +gr++AeIrdps+ + r++lg+f+taeeAa a+++a+++++g
HL.SW.v1.0.G034700.1 22 FLGVRRRP-WGRYAAEIRDPST---KERHWLGTFDTAEEAALAYDRAARSMRG 70
67******.**********965...5*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009739 | Biological Process | response to gibberellin |
GO:0010030 | Biological Process | positive regulation of seed germination |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 334 aa
Download sequence Send
to blast |
MKKQGSTAAA AAQGAQGEGA RFLGVRRRPW GRYAAEIRDP STKERHWLGT FDTAEEAALA 60 YDRAARSMRG SRARTNFVYS DMPAGSALTT ILSPDDPNTN LNFSSSAAIN HHQQQQQQQQ 120 TNNNITMADH HDRHHQQQQF LMMNNIMAAD KQLDLINNSH NQQYYDYFSS SSNSSPHEHY 180 FHSYYDQEKE KEQPPPPPPA AIMFSSSSDN NNYYNGNYSA AAAAAASAEL PPFPESEIIS 240 YYDHDDEQRR NSISTTSASS CGLFGNNHNI MGTNELLDYN YSNNDLYGSN ATHSPLFSTM 300 PSVSDAGLIP SLDPFDLAAA AASSTASSSS FFF*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
2gcc_A | 9e-20 | 17 | 77 | 1 | 62 | ATERF1 |
3gcc_A | 9e-20 | 17 | 77 | 1 | 62 | ATERF1 |
5wx9_A | 1e-19 | 13 | 77 | 3 | 71 | Ethylene-responsive transcription factor ERF096 |