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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
HL.SW.v1.0.G034529.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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Family |
NAC |
Protein Properties |
Length: 361aa MW: 40151.2 Da PI: 9.3119 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
HL.SW.v1.0.G034529.1 | genome | HOPBASE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 175.5 | 1.5e-54 | 15 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89
lppGfrFhPtdeel+++yL +k+++ +++ ++i +vd++k+ePw+Lp+k+k +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkd
HL.SW.v1.0.G034529.1 15 LPPGFRFHPTDEELITFYLINKISDATFTG-RAIGDVDLNKCEPWELPAKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKD 102
79*************************999.89***************99999************************************ PP
NAM 90 kevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
ke++++ ++elvg+kktLvfy+grap+gek++Wvmheyr+
HL.SW.v1.0.G034529.1 103 KEIFNSvTSELVGMKKTLVFYRGRAPRGEKSNWVMHEYRI 142
****9989999***************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 361 aa
Download sequence Send
to blast |
MSGSDGNINK DPEKLPPGFR FHPTDEELIT FYLINKISDA TFTGRAIGDV DLNKCEPWEL 60 PAKAKMGEKE WYFFSLRDRK YPTGVRTNRA TNTGYWKTTG KDKEIFNSVT SELVGMKKTL 120 VFYRGRAPRG EKSNWVMHEY RINSKSAFRT SKDEWVVCRV FQKSAGAKKY PTTQSRTINP 180 YALDTGHPTM LPSPMMQLAG DPTQFLFARN NYNMTNPELA ELSRVLRAGG SGGGSSNGGL 240 NLPSIPSQYN YPVPGGGCLT ISGLNLNLGG PPTQPLFRPL PPHPQPPMQL NNPQPPMNLN 300 QHDINTSSMM SSTSGSFVHH HTSTNGYGTD MNNVPNGPNN NRSYMNVDHC MDLENYWPAY 360 *
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 2e-54 | 15 | 169 | 17 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-54 | 15 | 169 | 17 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-54 | 15 | 169 | 17 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-54 | 15 | 169 | 17 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-54 | 15 | 169 | 20 | 174 | NAC domain-containing protein 19 |
3swm_B | 2e-54 | 15 | 169 | 20 | 174 | NAC domain-containing protein 19 |
3swm_C | 2e-54 | 15 | 169 | 20 | 174 | NAC domain-containing protein 19 |
3swm_D | 2e-54 | 15 | 169 | 20 | 174 | NAC domain-containing protein 19 |
3swp_A | 2e-54 | 15 | 169 | 20 | 174 | NAC domain-containing protein 19 |
3swp_B | 2e-54 | 15 | 169 | 20 | 174 | NAC domain-containing protein 19 |
3swp_C | 2e-54 | 15 | 169 | 20 | 174 | NAC domain-containing protein 19 |
3swp_D | 2e-54 | 15 | 169 | 20 | 174 | NAC domain-containing protein 19 |
4dul_A | 2e-54 | 15 | 169 | 17 | 171 | NAC domain-containing protein 19 |
4dul_B | 2e-54 | 15 | 169 | 17 | 171 | NAC domain-containing protein 19 |
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