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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
HL.SW.v1.0.G034044.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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Family |
NAC |
Protein Properties |
Length: 336aa MW: 37427.8 Da PI: 8.5385 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
HL.SW.v1.0.G034044.1 | genome | HOPBASE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 80.6 | 3.4e-25 | 2 | 71 | 64 | 128 |
NAM 64 rdkkyatgkrknratksgyWkatgkdkevlsk.....kgelvglkktLvfykgrapkgektdWvmheyrl 128
rd+ky++g r+nra++sgyWkatg+dk+++++ +++++g+kk Lvfykgr pkg+kt+W+mheyrl
HL.SW.v1.0.G034044.1 2 RDRKYPNGARPNRAAASGYWKATGTDKTIVTSsmggpHHQNIGVKKALVFYKGRPPKGVKTNWIMHEYRL 71
79****************************99999998999***************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 336 aa
Download sequence Send
to blast |
PRDRKYPNGA RPNRAAASGY WKATGTDKTI VTSSMGGPHH QNIGVKKALV FYKGRPPKGV 60 KTNWIMHEYR LAESPAYAYN SNLNKLNNNN NNKLKDSSMR LDDWVLCRIY KKTNVVHPTA 120 ATTAIPSDQE EEEQFVQETL LSSSPPCLLK LDQENSIDNS SSIIKPQKSC SFSNLLDTMD 180 YSLLSSLLAD CPSNNSTGFD HYSSISSSTG FNTSSSTILD QQQPFFFNGC SSGGSSNTTN 240 MIGSGNYMVQ QPSYNKLPQL QQLPLPPPTS VENHRLKRQR SSSDDQLQCP PKKCMINSCN 300 FLNTTTTTSN IQSDNYMNQL FLNQHLFLSP ELQFHG
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 2e-36 | 1 | 112 | 78 | 165 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-36 | 1 | 112 | 78 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-36 | 1 | 112 | 78 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-36 | 1 | 112 | 78 | 165 | NO APICAL MERISTEM PROTEIN |
3swm_A | 3e-36 | 1 | 112 | 81 | 168 | NAC domain-containing protein 19 |
3swm_B | 3e-36 | 1 | 112 | 81 | 168 | NAC domain-containing protein 19 |
3swm_C | 3e-36 | 1 | 112 | 81 | 168 | NAC domain-containing protein 19 |
3swm_D | 3e-36 | 1 | 112 | 81 | 168 | NAC domain-containing protein 19 |
3swp_A | 3e-36 | 1 | 112 | 81 | 168 | NAC domain-containing protein 19 |
3swp_B | 3e-36 | 1 | 112 | 81 | 168 | NAC domain-containing protein 19 |
3swp_C | 3e-36 | 1 | 112 | 81 | 168 | NAC domain-containing protein 19 |
3swp_D | 3e-36 | 1 | 112 | 81 | 168 | NAC domain-containing protein 19 |
4dul_A | 2e-36 | 1 | 112 | 78 | 165 | NAC domain-containing protein 19 |
4dul_B | 2e-36 | 1 | 112 | 78 | 165 | NAC domain-containing protein 19 |
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