 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
HL.SW.v1.0.G033496.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 332aa MW: 37471.1 Da PI: 4.3357 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| HL.SW.v1.0.G033496.1 | genome | HOPBASE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 58.9 | 8.3e-19 | 86 | 139 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+++++++q++ Le+ Fe ++++ e++ +LAk+lgL+ rqV vWFqNrRa++k
HL.SW.v1.0.G033496.1 86 KKRRLSANQVQFLEKNFELENKLEPERKVQLAKELGLQPRQVAVWFQNRRARYK 139
55689************************************************9 PP
|
| 2 | HD-ZIP_I/II | 125.3 | 2.9e-40 | 86 | 177 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90
kkrrls++qv++LE++Fe e+kLeperKv+la+eLglqprqvavWFqnrRAR+ktkqlEk+y++L+++yd+lk + + L ke e+L++e
HL.SW.v1.0.G033496.1 86 KKRRLSANQVQFLEKNFELENKLEPERKVQLAKELGLQPRQVAVWFQNRRARYKTKQLEKEYDSLQTSYDRLKYDYDILLKESETLKNE 174
9**************************************************************************************99 PP
HD-ZIP_I/II 91 lke 93
+++
HL.SW.v1.0.G033496.1 175 VNS 177
975 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 332 aa
Download sequence Send
to blast |
MASGKVYGGS NMSILLQDDR LPCNSDVLKS LWIPSSSSSF QGSKSRLSFE SVGGGDSTDG 60
SFFQPHDKDD DNVDDDYDGC FHQPGKKRRL SANQVQFLEK NFELENKLEP ERKVQLAKEL 120
GLQPRQVAVW FQNRRARYKT KQLEKEYDSL QTSYDRLKYD YDILLKESET LKNEVNSLNE 180
KLLSEEKDTK KNSENTEPEN PIVKTVVSET VSNVATMVVC KHEDASSAKS DVFDSDSPNY 240
AENYCSILEP ADSSHMFEPT DQSDYSQDED DNNNKNSSNC NLMSQSFLPP PLPLSLPCIP 300
KFEACCYDDP PASSCNFGFQ VEDQAFNFWS Y*
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 133 | 141 | RRARYKTKQ |
