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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
HL.SW.v1.0.G032965.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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| Family |
LBD |
| Protein Properties |
Length: 227aa MW: 24896.3 Da PI: 8.5759 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| HL.SW.v1.0.G032965.1 | genome | HOPBASE | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 89.8 | 3.5e-28 | 4 | 108 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklq 84
+C++C+vlr++C++dC+++p++ p++q++++ +++k++G++ +l+l++a p+ r+++++sl+yeA+ r+ P++G+vg+++++
HL.SW.v1.0.G032965.1 4 SCNGCRVLRKGCSDDCAIRPCLqwiksPDSQAQATLFLAKFYGRTGLLNLINAGPQYLRPAVFKSLLYEACGRIVSPINGSVGLLWTGD 92
6**************************************************************************************** PP
DUF260 85 qqleqlkaelallkee 100
++ +q+++e++l++++
HL.SW.v1.0.G032965.1 93 WDKCQAAVEAVLAGAP 108
*********9998765 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 227 aa
Download sequence Send
to blast |
MRTSCNGCRV LRKGCSDDCA IRPCLQWIKS PDSQAQATLF LAKFYGRTGL LNLINAGPQY 60
LRPAVFKSLL YEACGRIVSP INGSVGLLWT GDWDKCQAAV EAVLAGAPIK VETEEHALDS 120
KQFAHLKSPC AVDIRHVTKD DVVSDSNPKH MSQPKPRNRF KRTATGQKTL LGGGSNLGDL 180
TRFLNPGHEY WWPRLLGNGS TSAGEDVESM FSVEPAKPEP NKDQRGE
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