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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
HL.SW.v1.0.G031940.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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Family |
ERF |
Protein Properties |
Length: 461aa MW: 49109.7 Da PI: 7.8325 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
HL.SW.v1.0.G031940.1 | genome | HOPBASE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 63 | 6.4e-20 | 223 | 272 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrdp + +r++lg+f+tae Aa+a++ a+++++g
HL.SW.v1.0.G031940.1 223 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDDAALRFRG 272
7********.**********7.....337*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 461 aa
Download sequence Send
to blast |
MCSLKVANQR TPNDASFRAQ DQGHGGGDQD RDLDQQQMNI LNQYGVVSPP HPAPSQMFSS 60 GYSSPTEMSA IVSALTHVVS GSRSRVGGGG RGDQFWGYDN RFGSGGVQVY ASPSPPNSSE 120 TTFSGVTTAS GSGSGSWSGQ KRGRDEQAAS AHRVLVDSAA ASAPTRAFRG DFKPTPAESS 180 SASATEEVTT TMSAASTAAG PVVPATPSSE AATPEESGER RRRYRGVRQR PWGKWAAEIR 240 DPHKAARVWL GTFDTAEAAA RAYDDAALRF RGNRAKLNFP ENVRSLVPPR QNFQAAPAPA 300 PTHLTIANSP ETLLAAQPNF YQATPYQGSN SDALRDYLQY SQLLQSSGDF HGQQLQQHQQ 360 MQQPPSLLEQ MIYNSQLASL QSPLMIPSSS SSAASTLFPS SVSSSASSVS HPLFFSSQVQ 420 QQPQLYFRPL PENQNPASSS DYPGPPWPNP SGYNPPPSSG *
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
2gcc_A | 1e-22 | 224 | 285 | 6 | 68 | ATERF1 |
3gcc_A | 1e-22 | 224 | 285 | 6 | 68 | ATERF1 |