 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
HL.SW.v1.0.G031565.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
|
| Family |
WRKY |
| Protein Properties |
Length: 368aa MW: 41197.3 Da PI: 5.149 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| HL.SW.v1.0.G031565.1 | genome | HOPBASE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 72.8 | 4.6e-23 | 142 | 202 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
+Dg +WrKYGqK++ ++e+pr+Y+rCt + gC+++++v++ +++pk+ ++tY geH+++
HL.SW.v1.0.G031565.1 142 EDGQAWRKYGQKDILNAEYPRAYFRCTRKydqGCRATRQVQQIQDNPKLYQTTYIGEHTCK 202
8**************************998899**************************97 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009862 | Biological Process | systemic acquired resistance, salicylic acid mediated signaling pathway |
| GO:0009864 | Biological Process | induced systemic resistance, jasmonic acid mediated signaling pathway |
| GO:0010200 | Biological Process | response to chitin |
| GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
| GO:0050832 | Biological Process | defense response to fungus |
| GO:1900056 | Biological Process | negative regulation of leaf senescence |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 368 aa
Download sequence Send
to blast |
MGTCIWPQNL SKRLVEELIQ GREMATQLQL MLHKPPFGEH GGGSVKSSSA EELASKIYNS 60
FTQTLSVVAG YNNINNIIIN SNSSDQTSQV NPDQASHCDE PSSDDSGESK KRSSSAIKDR 120
RGCYKRSRKN SQSWTTTVST LEDGQAWRKY GQKDILNAEY PRAYFRCTRK YDQGCRATRQ 180
VQQIQDNPKL YQTTYIGEHT CKNILKAPQM IKDSEYTWDS APNNLNVVTT TTSHHYNNAS 240
KSIVKESDDA AQEVKPIREP STTTTDSCLS DKLSLDDHNE IINLWPSELK DLELSDPSMG 300
LLCPRLGGSG SDDHDNHVSI MFSFGDRTTC STSATSRSFD MDEFVDTSID FRSCDFEFDE 360
NEFHLGI*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6ir8_A | 2e-25 | 135 | 202 | 2 | 69 | OsWRKY45 |
