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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
HL.SW.v1.0.G030496.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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Family |
ERF |
Protein Properties |
Length: 332aa MW: 36346.5 Da PI: 6.8276 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
HL.SW.v1.0.G030496.1 | genome | HOPBASE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58.6 | 1.5e-18 | 20 | 70 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
++ GVr+++ +grWvAeI+d ++ r +lg+f+tae+Aa+a++ a+++l+g+
HL.SW.v1.0.G030496.1 20 KFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEDAARAYDDAARALRGA 70
799******.7*********....4456*************************995 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 332 aa
Download sequence Send
to blast |
MVTTGLRRKS SSSTTRGHQK FVGVRQRPSG RWVAEIKDSL QKVRLWLGTF DTAEDAARAY 60 DDAARALRGA NARTNFQLPV SSSNQDDQDH NNLEPFSFEQ VCAPTSSAAS EGFIGALKAK 120 LLDSNGEAKP TTKAAAILFP FTAKPPHQNN QYMMSNVNTA DDQLSVVLDD HNHGLGHGGQ 180 QGHDQLHGDH NSSWSGVWSS NKPPPSTIVS SHSTDNNTTH HVKAASSSSD HHHASNLSSS 240 PSALSINNNN LSIDTEEEMM MMVQYPSAIT YDKNDIHHHH HHLHHQHQEQ QFDDAATFFG 300 GSNSINSTST SSSWDPLSFS YHSPKFYSKL N*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5wx9_A | 4e-15 | 18 | 76 | 12 | 71 | Ethylene-responsive transcription factor ERF096 |