 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
HL.SW.v1.0.G028754.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
|
| Family |
Trihelix |
| Protein Properties |
Length: 255aa MW: 28761.7 Da PI: 9.7199 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| HL.SW.v1.0.G028754.1 | genome | HOPBASE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 37.9 | 4.7e-12 | 20 | 90 | 1 | 67 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergfe..rspkqCkekwenlnkrykkikeg 67
+W++ + +Liea ++ +l+rg+l++++W+ev++++ r+ g++ ++ +qCk++ + l+k+yk +k
HL.SW.v1.0.G028754.1 20 CWSEGATETLIEAWGDRYLQLNRGNLRQKDWKEVAEAVngRDNGLKpyKTDVQCKNRVDTLKKKYKLEKSK 90
7*************************************99888885337*****************98865 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 255 aa
Download sequence Send
to blast |
MDRPGKTTAT RPHAGGREDC WSEGATETLI EAWGDRYLQL NRGNLRQKDW KEVAEAVNGR 60
DNGLKPYKTD VQCKNRVDTL KKKYKLEKSK PLPSAWAFYP RLDFLIGSTN KKPTTVTLTI 120
KSAKPTTSRP GPKPPAYLAR SPDSSPENDD NVEEDDGDGG GFNGTRVVMR KHRMEAVDLS 180
DGAACRELAR AILKFGEIYE RIESSKQQKM MELEKERMEF AKELESQRLN MFMDAQLELE 240
KMKRAKYAPG SGKK*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269|PubMed:21330492}. |
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT5G05550.1 | 1e-68 | sequence-specific DNA binding transcription factors |
