|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
HL.SW.v1.0.G027812.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
|
Family |
ERF |
Protein Properties |
Length: 194aa MW: 22295 Da PI: 8.3709 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
HL.SW.v1.0.G027812.1 | genome | HOPBASE | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 38.1 | 3.9e-12 | 69 | 110 | 3 | 51 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51
+GV++ k + +W A I++ +k+++lg+ g+ eeAa+++++a+
HL.SW.v1.0.G027812.1 69 MRGVYY-K-NMKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 110
79**96.5.7*********4.....5********************985 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 194 aa
Download sequence Send
to blast |
MYCRSLFNLS LFCCAFYQNT SVKGGQGSTN VSDCGSLKEE HNQQVSGPPI KRRKRHRRKN 60 FQNQEQCLMR GVYYKNMKWQ AAIKVDKKQI HLGTVGSQEE AARLYDRAAF MCGREPNFEL 120 SEADKQELRQ FKWEEFLAMT RHAITHKKHR RRIGTEPEKS PEPSPLQNDD SDSKNEENDL 180 SGSEDVEADM SVS*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |