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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
HL.SW.v1.0.G027723.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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Family |
ERF |
Protein Properties |
Length: 139aa MW: 15646.4 Da PI: 4.5464 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
HL.SW.v1.0.G027723.1 | genome | HOPBASE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 56.2 | 8.3e-18 | 84 | 133 | 2 | 54 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkle 54
y+GVr+++ +g+++AeIrd + k r++lg+f++ae Aa a+++a+ +l+
HL.SW.v1.0.G027723.1 84 SYRGVRRRP-WGKYAAEIRDsT--R-KGIRVWLGTFDSAEAAALAYDQAAFALR 133
69*******.**********32..2.24**********************9987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 139 aa
Download sequence Send
to blast |
MESSFYFQFS PAAEESSFGN YSLESLSWSD LLSFNDTVVE ELVNPELQYD VVKEEPIEVT 60 SNPNDDVVGV LQNNKGNKEM TKKSYRGVRR RPWGKYAAEI RDSTRKGIRV WLGTFDSAEA 120 AALAYDQAAF ALRVLSFR*
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT1G06160.1 | 7e-19 | octadecanoid-responsive Arabidopsis AP2/ERF 59 |