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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
HL.SW.v1.0.G025358.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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| Family |
LBD |
| Protein Properties |
Length: 209aa MW: 22839.1 Da PI: 7.3634 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| HL.SW.v1.0.G025358.1 | genome | HOPBASE | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 92.7 | 4.3e-29 | 2 | 100 | 1 | 94 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklq 84
+C++C+vlr++C ++Cvl+ ++ p++q +++ +++k+FG+s ++++++a+p+++r+++++sl++eA+ r+ +Pv+Gavg++++++
HL.SW.v1.0.G025358.1 2 SCNGCRVLRKGCGESCVLRSCLhwiesPEAQGNATLFLAKFFGRSDLMSFISAVPDHHRPALFQSLLFEACGRTVNPVNGAVGLLSSGN 90
6**************************************************************************************** PP
DUF260 85 qqleqlkael 94
++++q+++e+
HL.SW.v1.0.G025358.1 91 WHVCQAAVET 100
******9886 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 209 aa
Download sequence Send
to blast |
MSCNGCRVLR KGCGESCVLR SCLHWIESPE AQGNATLFLA KFFGRSDLMS FISAVPDHHR 60
PALFQSLLFE ACGRTVNPVN GAVGLLSSGN WHVCQAAVET ILCGGVLRPM QGGLLMQKLD 120
ESSDMLAVAG DTSSWPSSAY RYFPSLPSIY DPRQEQYYSG ARGSSSIFPM TEKLVWRDSI 180
SRSSEESVMT KSFGIGDHKE QKLLNLFV*
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