PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

HL.SW.v1.0.G025096.1

Organism

Humulus lupulus

Taxonomic ID

3486

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus

Family

bZIP

Protein Properties

Length: 136aa MW: 15734.8 Da PI: 9.3382

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
HL.SW.v1.0.G025096.1	genome	HOPBASE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	46.6	7.4e-15	51	102	5	56
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 ++ rr+++NRe+ArrsR RKk +e L+e v L+ eN++Lk++l ++ +++ HL.SW.v1.0.G025096.1 51 QKLRRMISNRESARRSRWRKKRHLEDLTEQVNRLKVENRDLKNRLAHMAQQC 102 678***************************************9999999888 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.2E-13	47	111	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	6.8E-12	49	103	No hit	No description
PROSITE profile	PS50217	10.898	49	101	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.3E-11	51	102	IPR004827	Basic-leucine zipper domain
CDD	cd14702	6.07E-16	52	103	No hit	No description
SuperFamily	SSF57959	7.88E-12	52	102	No hit	No description
PROSITE pattern	PS00036	0	54	69	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 136 aa Download sequence Send to blast
MFLSKEAAQC QYGPVFEVGE IEELWSLLQP GTINNSGSEG SNRAVYSVDE QKLRRMISNR 60 ESARRSRWRK KRHLEDLTEQ VNRLKVENRD LKNRLAHMAQ QCHVAWREND RLTSEFSALQ 120 SKLSDLCRIL VAMQS*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010999906.1	4e-53	PREDICTED: basic leucine zipper 43
TrEMBL	A0A2P5CWW1	2e-70	A0A2P5CWW1_PARAD; Basic-leucine zipper transcription factor
STRING	POPTR_0014s01390.1	2e-51	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF5996	30	52

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49760.1	4e-22	basic leucine-zipper 5