PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID HL.SW.v1.0.G024280.1
Organism
Humulus lupulus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
Family bZIP
Protein Properties Length: 269aa    MW: 30660.9 Da    PI: 5.301
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
HL.SW.v1.0.G024280.1genomeHOPBASEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.24.1e-14155213563
                           CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                           ++errk +NRe+A+rsR+RK++e + L+e++ +L+ e ++L++ +  + +++ +l+ e+
  HL.SW.v1.0.G024280.1 155 RKERRKLSNRESAKRSRLRKQQENKMLQERAMKLQHEVSELRDGVVLIAEKCHQLTEEN 213
                           79*****************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.6E-10149210No hitNo description
SMARTSM003381.6E-11151215IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.668153216IPR004827Basic-leucine zipper domain
PfamPF001701.4E-10155213IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.19E-7155208No hitNo description
CDDcd147021.91E-11156207No hitNo description
PROSITE patternPS000360158173IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    Send to blast
MKIDYPERCH HKEFEEYFNV DLQTFMDNAA KKEEQIFEEE KIVLAKTFEE NAVSLAVYGD  60
NGLRKEGGVA SPSASWGIED SHTETNNTNH SLYAKRQRLC DGAVVQNRDT LHDRSVTELS  120
LQDSMANMVE TKNLGLIPGQ DGTQSLLTKE QLDERKERRK LSNRESAKRS RLRKQQENKM  180
LQERAMKLQH EVSELRDGVV LIAEKCHQLT EENISLLDDL EKASCPNDVI SELKARFHAL  240
VNHRKRSSSS DSDSTDDDQI RESTSHSD*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2P5EH907e-64A0A2P5EH90_TREOI; Basic-leucine zipper transcription factor
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1575779
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.23e-12G-box binding factor 1