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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
HL.SW.v1.0.G023154.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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Family |
bHLH |
Protein Properties |
Length: 623aa MW: 69316.8 Da PI: 6.6021 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
HL.SW.v1.0.G023154.1 | genome | HOPBASE | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 40.4 | 5.2e-13 | 453 | 499 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
+h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI++Lq
HL.SW.v1.0.G023154.1 453 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYINELQ 499
799***********************66......******************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 623 aa
Download sequence Send
to blast |
MKTELGFGGS GVWNDEDKTM VQAVLGTRAF DYLITSSVTN ENLLMAVGSD ENLQNKLSDL 60 VERPNASNFS WNYAIFWQIS RSKSGDWVLG WGDGSCREPR EGEESEATRF FNLRLEDETQ 120 QRMRKRVLQK LHNLFGGSDE DNYALGLDRV TDTEIFFLAS MYFSFPRGEG GPGKCYASGK 180 HLWLLDALKS SSDYCVRSFL AKSAGIQTIV LVPTEVGVVE LGSVRSVGES LELLQSVRSL 240 FSTQSSLVRV SKPMAMLPMM AEKRDENVNL TNSGILERNE SVGVHKIFGQ DLNAGAVARP 300 HYREKLAIRK LEERPWDLYP NGNGSRIAFS SPRNGIPGST WPHSLQGVKQ QGNPTEIYAS 360 QSPGSNNIQE IVNGVREDFR LNNYQPQKQV QMQIDFSGAT SRSTVINHRP TSAESEHSDV 420 EASCKEERPS TADERRPRKR GRKPANGREE PLNHVEAERQ RREKLNQRFY ALRAVVPNIS 480 KMDKASLLGD AIAYINELQA KLKAMEAERE KVGSSSTAAA METNNPDMEI QSRVPDVDVK 540 VVNDEVIVRV SCHLDSHPAS RVIQAFKEAQ ITVVDSKFTT VNDTVFHDFV IKSQGSEQLT 600 KEKLVAAFSI EANSLRTLSS VG*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5gnj_A | 7e-30 | 447 | 522 | 2 | 77 | Transcription factor MYC2 |
5gnj_B | 7e-30 | 447 | 522 | 2 | 77 | Transcription factor MYC2 |
5gnj_E | 7e-30 | 447 | 522 | 2 | 77 | Transcription factor MYC2 |
5gnj_F | 7e-30 | 447 | 522 | 2 | 77 | Transcription factor MYC2 |
5gnj_G | 7e-30 | 447 | 522 | 2 | 77 | Transcription factor MYC2 |
5gnj_I | 7e-30 | 447 | 522 | 2 | 77 | Transcription factor MYC2 |
5gnj_M | 7e-30 | 447 | 522 | 2 | 77 | Transcription factor MYC2 |
5gnj_N | 7e-30 | 447 | 522 | 2 | 77 | Transcription factor MYC2 |
Search in ModeBase |
Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 434 | 442 | RRPRKRGRK |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that negatively regulates jasmonate (JA) signaling (PubMed:30610166). Negatively regulates JA-dependent response to wounding, JA-induced expression of defense genes, JA-dependent responses against herbivorous insects, and JA-dependent resistance against Botrytis cinerea infection (PubMed:30610166). Plays a positive role in resistance against the bacterial pathogen Pseudomonas syringae pv tomato DC3000 (PubMed:30610166). {ECO:0000269|PubMed:30610166}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by wounding, feeding with herbivorous insects, infection with the fungal pathogen Botrytis cinerea and infection with the bacterial pathogen Pseudomonas syringae pv tomato DC3000. {ECO:0000269|PubMed:30610166}. |