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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
HL.SW.v1.0.G022150.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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| Family |
LBD |
| Protein Properties |
Length: 241aa MW: 26042.7 Da PI: 6.9567 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| HL.SW.v1.0.G022150.1 | genome | HOPBASE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 134.1 | 5.4e-42 | 87 | 186 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleq 89
+CaaCk+lrr+C+++Cvlapyfp ++p kf ++h++FGasn++k+l+++pe++r+da+ss+vyeA+ar+rdPvyG++g i +lq+q+++
HL.SW.v1.0.G022150.1 87 PCAACKILRRRCVDKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQEIPESQRTDAVSSMVYEANARIRDPVYGCAGAICQLQKQVSE 175
7**************************************************************************************** PP
DUF260 90 lkaelallkee 100
l+ +la++++e
HL.SW.v1.0.G022150.1 176 LQGQLAKAQAE 186
*******9987 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 241 aa
Download sequence Send
to blast |
MEFKPKAQTP PRLTVPTPFS LSVPLQYSPN NSSSSSPTLN SSQLSSPASS FPSPSPPTSQ 60
SSPTSTTNVN PTPPPPPPPP PAIVMSPCAA CKILRRRCVD KCVLAPYFPP TEPLKFTIAH 120
RVFGASNIIK FLQEIPESQR TDAVSSMVYE ANARIRDPVY GCAGAICQLQ KQVSELQGQL 180
AKAQAELVNM QCQQANLIAL ICMDVTQLQD PNSQQQPPYV DTSCFLDDNT LGTTWEPLWT 240
*
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