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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
HL.SW.v1.0.G020941.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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Family |
NAC |
Protein Properties |
Length: 356aa MW: 40679.2 Da PI: 4.845 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
HL.SW.v1.0.G020941.1 | genome | HOPBASE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 181.6 | 1.9e-56 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87
lppGfrFhPtdeelv +yL +k++g+++el e+i+evd+yk+ePwdLp k + +++ ewyf+s+rd+ky++g+r+nrat++gyWkatg
HL.SW.v1.0.G020941.1 6 LPPGFRFHPTDEELVAYYLDRKITGQTIEL-EIIPEVDLYKCEPWDLPdKsYLPSKDMEWYFYSPRDRKYPNGSRTNRATRAGYWKATG 93
79****************************.99**************95335666888******************************* PP
NAM 88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
kd++v+s +++ vg+kktLv+y+grap+g +t+Wvmheyrl
HL.SW.v1.0.G020941.1 94 KDRAVHS-QRRPVGMKKTLVYYRGRAPHGIRTNWVMHEYRL 133
*******.999****************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 356 aa
Download sequence Send
to blast |
MAPMSLPPGF RFHPTDEELV AYYLDRKITG QTIELEIIPE VDLYKCEPWD LPDKSYLPSK 60 DMEWYFYSPR DRKYPNGSRT NRATRAGYWK ATGKDRAVHS QRRPVGMKKT LVYYRGRAPH 120 GIRTNWVMHE YRLVDDSLGG TVSSTLKDSY ALCRVFKKTI QIPKCNKEEK PDNNSSTTTT 180 NGRTTEKESA AIVINESNIT VDHHISRRVE NEDEYYPNNN KFLSETSSSD LTQGTPTENG 240 VLDDFQAPFA SDNEANSAAD LYSLGVNCSN LVQEMQMPSY ESLYQLAYPP LELDDFPQIN 300 LEEMKLMKSE TTEECMSYEK FRDYMNGTVE EIFSICSSSS HHEENSANAL SMQQN*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 9e-59 | 1 | 158 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 9e-59 | 1 | 158 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 9e-59 | 1 | 158 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 9e-59 | 1 | 158 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
4dul_A | 9e-59 | 1 | 158 | 12 | 165 | NAC domain-containing protein 19 |
4dul_B | 9e-59 | 1 | 158 | 12 | 165 | NAC domain-containing protein 19 |
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