 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
HL.SW.v1.0.G020800.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 347aa MW: 38056.3 Da PI: 8.1631 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| HL.SW.v1.0.G020800.1 | genome | HOPBASE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 56.2 | 5.8e-18 | 200 | 254 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ +++keq Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k
HL.SW.v1.0.G020800.1 200 RKKLRLSKEQSAFLEESFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTK 254
778899***********************************************98 PP
|
| 2 | HD-ZIP_I/II | 128.4 | 3e-41 | 200 | 290 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89
+kk+rlskeq+++LEesF+e+++L+p++Kv+la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l++en+rL+ke +eLr
HL.SW.v1.0.G020800.1 200 RKKLRLSKEQSAFLEESFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTDENRRLQKELQELR- 287
69*************************************************************************************9. PP
HD-ZIP_I/II 90 elk 92
+lk
HL.SW.v1.0.G020800.1 288 ALK 290
555 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 347 aa
Download sequence Send
to blast |
MELALSLGET TPTTPFSFLH KAQKITNNST NLNNNQAELG FCMSLGNSAF SSRSSSSSDQ 60
DHQDKKDHDL SRPVSSSSDL QLPLQLDLLP SAPVPRSQTT SQLRFPWLTD NCTIIGPGKG 120
FDVNRLPAVG AVPEETEEGI TISSPNSTLS SFHMDFCVRS SSSGGVRTSN KRDHSNNNME 180
CETERASSRA SDDEENGSTR KKLRLSKEQS AFLEESFKEH STLNPKQKVA LAKQLNLRPR 240
QVEVWFQNRR ARTKLKQTEV DCEYLKRCCE TLTDENRRLQ KELQELRALK TSQPFYMQLP 300
ATTLTMCPSC ERVATAGAGT AAGSAANSGN PSPHRFSHGQ VGKGGS*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 198 | 204 | TRKKLRL |
| 2 | 248 | 256 | RRARTKLKQ |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
