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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
HL.SW.v1.0.G020668.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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Family |
WRKY |
Protein Properties |
Length: 467aa MW: 51711.4 Da PI: 6.4173 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
HL.SW.v1.0.G020668.1 | genome | HOPBASE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 105 | 3.9e-33 | 249 | 307 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK vk+s++prsYYrCt++gC vkk+vers+++p++v++tYeg+H+h+
HL.SW.v1.0.G020668.1 249 LDDGYRWRKYGQKAVKNSPYPRSYYRCTTPGCGVKKRVERSSDNPTIVVTTYEGQHTHP 307
59********************************************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 467 aa
Download sequence Send
to blast |
MDKKEEELIK KENSSIIMAN SATTPTPTPF TNNNNNAFFS SEEYHFFGST NISSLFDNNY 60 HYYFNNNNNI IMPPVSSSCI TEDHHQHQQQ QASSLGFMDL LGINQDFGSS LFYLPPPPED 120 HSNDDMLILN NIDNDMGLSS PPPQPPPPPP IPSSSPASST VLPETSEVLN STTPTTPNSS 180 TLSSSSNEER QQKVPVIPDQ ETEAEAEAET EQDPEKTQNN KQLKPKKKNQ KRQREPRFAF 240 MTKSEVDHLD DGYRWRKYGQ KAVKNSPYPR SYYRCTTPGC GVKKRVERSS DNPTIVVTTY 300 EGQHTHPCPV TPRGSLGISP ASADSGAFFS AAGSHYGGAA AMPMLPSHQH QFQYRQSSNP 360 YLYSSSSTPY SSSINMISRS NNSTITTANH ISNTPSFVDQ EKHNNSNNNN NNDYINSNNE 420 VVGVTTTTKS SSSPSTANLV MRNHGGLLQD IVPTRMRSED HHHQRS*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |