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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | HL.SW.v1.0.G020651.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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Family | bZIP | ||||||||
Protein Properties | Length: 201aa MW: 22823.4 Da PI: 7.9564 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.4 | 2.4e-11 | 91 | 137 | 5 | 51 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 ++ rr+++NRe+ArrsR RK+ +e+L+++v L eN++L ++l HL.SW.v1.0.G020651.1 91 RKRRRMISNRESARRSRMRKQRHLENLRNEVNRLRVENRELTNQLRL 137 5789*************************************987765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 7.0E-11 | 82 | 137 | No hit | No description |
SMART | SM00338 | 9.0E-15 | 87 | 151 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.013 | 89 | 152 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 6.0E-8 | 91 | 137 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.12E-11 | 91 | 138 | No hit | No description |
CDD | cd14702 | 3.66E-20 | 92 | 143 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 94 | 109 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence Send to blast |
MFPSSDSILG NPFPSFDGGF TPWDYLDLLP AVQTPEPVEF TSNSAGSGDT MAQSSKPIMS 60 VSGSGSDDPN SNRSNSKREC PDQPSSVVDE RKRRRMISNR ESARRSRMRK QRHLENLRNE 120 VNRLRVENRE LTNQLRLFSC HFQCVRTENG QLQSEHAALR QKLYDINQIL LFRQLQQFSS 180 PTYIEPCNDV ISEQTPSLIT * |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 90 | 94 | RKRRR |
2 | 103 | 110 | RRSRMRKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010106904.1 | 2e-75 | light-inducible protein CPRF2 | ||||
TrEMBL | A0A2P5FS86 | 3e-98 | A0A2P5FS86_TREOI; Basic-leucine zipper transcription factor | ||||
STRING | XP_010106904.1 | 6e-75 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5435 | 32 | 54 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49760.1 | 5e-22 | basic leucine-zipper 5 |