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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
HL.SW.v1.0.G020471.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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| Family |
HD-ZIP |
| Protein Properties |
Length: 218aa MW: 25289.6 Da PI: 5.0971 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| HL.SW.v1.0.G020471.1 | genome | HOPBASE | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 55.4 | 1.1e-17 | 25 | 76 | 5 | 56 |
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+++++q+++Le+ F+ ++++ +e++ +LA++lg++ rqV vW+qN+Ra+++
HL.SW.v1.0.G020471.1 25 KRLNEHQVRVLERNFNYEKKLEQEHKHQLADQLGIPARQVAVWYQNKRARWR 76
5689***********************************************9 PP
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| 2 | HD-ZIP_I/II | 102.8 | 3e-33 | 23 | 113 | 2 | 92 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90
+k+rl+++qv++LE++F+ e+kLe+e+K++la +Lg+ +rqvavW+qn+RAR++t+ lE+d+++L++++d+ +e++rLe ev Lr e
HL.SW.v1.0.G020471.1 23 NKKRLNEHQVRVLERNFNYEKKLEQEHKHQLADQLGIPARQVAVWYQNKRARWRTQSLEVDCTTLQHRLDTALAEKRRLEGEVLVLRGE 111
69***********************************************************************************9988 PP
HD-ZIP_I/II 91 lk 92
l+
HL.SW.v1.0.G020471.1 112 LD 113
86 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 218 aa
Download sequence Send
to blast |
MDQIQNQKGS SSSSTKVVAQ NMNKKRLNEH QVRVLERNFN YEKKLEQEHK HQLADQLGIP 60
ARQVAVWYQN KRARWRTQSL EVDCTTLQHR LDTALAEKRR LEGEVLVLRG ELDMACQALQ 120
LTDNNITIYY DNTTYYDNIN NNIDSSYCTA TTTTSTTATT DQEQGQEGDG RSYSSFSDNP 180
QYDHHHVINN YDHLLDHIDD DQFLQIDHDF FSSLIDW*
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