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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
HL.SW.v1.0.G018744.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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| Family |
WRKY |
| Protein Properties |
Length: 343aa MW: 38661.2 Da PI: 5.7939 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| HL.SW.v1.0.G018744.1 | genome | HOPBASE | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 87.6 | 1.1e-27 | 117 | 178 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
++Dg++WrKYGqK++ g+++prsY+rCt++ gC ++k+v+rs++d +++eitY+g H+++
HL.SW.v1.0.G018744.1 117 MEDGHSWRKYGQKDILGANHPRSYFRCTHRktqGCLATKQVQRSDQDSSILEITYKGYHTCR 178
58***************************98999**************************96 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0010200 | Biological Process | response to chitin |
| GO:0048527 | Biological Process | lateral root development |
| GO:0005730 | Cellular Component | nucleolus |
| GO:0000987 | Molecular Function | core promoter proximal region sequence-specific DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 343 aa
Download sequence Send
to blast |
MEKKTDFEQK FLINELMEGK ELAKQLMGYL QPSSSHETRD VLVEKILSSY EKALSVLKWD 60
GETKPRQSSP CSFGNNSPKS VIIDQDSNHR DVFKKRKTTV KGEQVKVCVG TGSEGHMEDG 120
HSWRKYGQKD ILGANHPRSY FRCTHRKTQG CLATKQVQRS DQDSSILEIT YKGYHTCRRA 180
SQPAIVASSS LTKMSHFRHP EVVHKDKLKQ SQEKPFSLEV KTEDLDTRED YMFQPFSFAS 240
TPIESEDIPF FSEIIENDFA GAFSSPFISP TTSDSAYFSV SPCHKMSSFG LANSVQTPES 300
DLTEILSAPT SLANSPMCDL DLSLDNVDFE MNFPFDSDEY FS*
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