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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
HL.SW.v1.0.G018728.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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Family |
NAC |
Protein Properties |
Length: 390aa MW: 43776.6 Da PI: 6.7982 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
HL.SW.v1.0.G018728.1 | genome | HOPBASE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 174.1 | 4e-54 | 10 | 135 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89
lppGfrFhPtdeel+++yL +kv+++ ++ ++++ vd++k+ePwdLp k++ +ekewyfFs +d+ky+tg r+nrat++gyWk+tgkd
HL.SW.v1.0.G018728.1 10 LPPGFRFHPTDEELITYYLGRKVSDSGFTP-KAVAVVDLNKCEPWDLPDKASMGEKEWYFFSLKDRKYPTGLRTNRATEAGYWKTTGKD 97
79*************************998.78***************988999*********************************** PP
NAM 90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
ke+l+ +g lvg+kktLvfykgrap+gek++Wvmheyrl
HL.SW.v1.0.G018728.1 98 KEILR-SGVLVGMKKTLVFYKGRAPRGEKSNWVMHEYRL 135
****9.999****************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 390 aa
Download sequence Send
to blast |
MAMAMGIEEL PPGFRFHPTD EELITYYLGR KVSDSGFTPK AVAVVDLNKC EPWDLPDKAS 60 MGEKEWYFFS LKDRKYPTGL RTNRATEAGY WKTTGKDKEI LRSGVLVGMK KTLVFYKGRA 120 PRGEKSNWVM HEYRLQNNHP FNHPNKEEWV VCRVFQKSSG LKKPQQTPSS HEPSIESPCD 180 DTNSIVNNNE FGDFDIMPNL NINNNHSNNL STQLGFMMNS SGSSNNNLMN NNMMMNLNNM 240 NYWTNNNSTT ANGTTSTSTS SPLLPALSSW HNSNLLNPNL SMNSFILKAL QLRNSASNNI 300 DQNYNNPYMP QQGISHHHHH QFGSDILGST ATSNGFHLAS SSSSLLLSKM NNNNNNSNII 360 IDSTSQVQQQ EQPFSLDSIG EDDDHHVLF*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
3swm_A | 6e-57 | 5 | 163 | 7 | 174 | NAC domain-containing protein 19 |
3swm_B | 6e-57 | 5 | 163 | 7 | 174 | NAC domain-containing protein 19 |
3swm_C | 6e-57 | 5 | 163 | 7 | 174 | NAC domain-containing protein 19 |
3swm_D | 6e-57 | 5 | 163 | 7 | 174 | NAC domain-containing protein 19 |
3swp_A | 6e-57 | 5 | 163 | 7 | 174 | NAC domain-containing protein 19 |
3swp_B | 6e-57 | 5 | 163 | 7 | 174 | NAC domain-containing protein 19 |
3swp_C | 6e-57 | 5 | 163 | 7 | 174 | NAC domain-containing protein 19 |
3swp_D | 6e-57 | 5 | 163 | 7 | 174 | NAC domain-containing protein 19 |
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