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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
HL.SW.v1.0.G018372.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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Family |
TALE |
Protein Properties |
Length: 511aa MW: 57210.5 Da PI: 6.451 |
Description |
TALE family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
HL.SW.v1.0.G018372.1 | genome | HOPBASE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 25.8 | 1.8e-08 | 438 | 476 | 18 | 54 |
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54
+F++ ++yp+ +e+ LA k gLt +qV++WF N R +
HL.SW.v1.0.G018372.1 438 MFQNflHPYPKDAEKHLLAVKSGLTRNQVSNWFINARVR 476
5887779******************************88 PP
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2 | BELL | 77.8 | 1.6e-25 | 308 | 376 | 2 | 71 |
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeq 71
r++ + k+akLlsll+ Vd+rY+q+ ++++tv+s+F+a+++l++ ++++++Al++iS ++ L+++i+++
HL.SW.v1.0.G018372.1 308 RRQFETKRAKLLSLLQLVDDRYNQCLDEIHTVVSAFHAATELDP-QIHARFALQTISVLYKGLRERISKH 376
678899**************************************.**********************987 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 511 aa
Download sequence Send
to blast |
MENNQAFNIT QEMIMTSRND LTAMNSSFVL QSYLDDFSYS NPLFYSYKRS FSRDEASSLG 60 GVGSSSSAMC TSTELQEEAA KFMAAKAAAA AGHGLQENLN NLAISVPQMY SSDDVISGFV 120 SNENNNNSYV TYNNQWGDVE LVGKTSEFHQ TFDPNVWNSN NNHNGSSDFS NELSLSLATS 180 QPSVITGMAT TIPSQCSDMS RSAALPARNT ETVLVSEQTS CNNNKVLSPS FGSYRPLQLS 240 QVISGSRYLS AAQEILAHFA SFSLENIGHD HSSSSYLMNS CSLSTMSPMD STSDGGRLEG 300 ETESESHRRQ FETKRAKLLS LLQLVDDRYN QCLDEIHTVV SAFHAATELD PQIHARFALQ 360 TISVLYKGLR ERISKHCLAM GATSFDQFGR ESSGSDKSFE TSFIQKQWAL QQLKKKDQLW 420 RPQRGLPERS VSVLRAWMFQ NFLHPYPKDA EKHLLAVKSG LTRNQVSNWF INARVRLWKP 480 MIEEMYAELN RRKENNNNNN NNINQIQRYN *
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor which may be involved in the signal transduction pathway downstream of the COP1 gene. Controls floral competency as a specific activator of FLC expression. Is responsive of the nuclear import of SHOOT MERISTEMLESS (STM). {ECO:0000269|PubMed:17908157}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By light. In etiolated seedlings, maximally expressed after 3 days of illumination. |