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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
HL.SW.v1.0.G016378.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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Family |
NAC |
Protein Properties |
Length: 265aa MW: 30098 Da PI: 10.007 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
HL.SW.v1.0.G016378.1 | genome | HOPBASE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 167.1 | 5.9e-52 | 14 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89
lppGfrFhPtdeelvv+yLk+kv++ +l++ ++i+ev+++k++PwdLp e+e yfFs+r+ ky++g+r+nrat sgyWkatg d
HL.SW.v1.0.G016378.1 14 LPPGFRFHPTDEELVVQYLKRKVHSYPLPA-SIIPEVEVCKSDPWDLPGD---LEQERYFFSTREAKYPNGNRSNRATGSGYWKATGID 98
79****************************.89***************54...46799******************************* PP
NAM 90 kevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
k+++++ ++++vg+kktLvfy+g+ p+g++tdW+mheyrl
HL.SW.v1.0.G016378.1 99 KQIVTSrGNHVVGMKKTLVFYRGKPPQGTRTDWIMHEYRL 138
**999857788***************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 265 aa
Download sequence Send
to blast |
MEKLNFVKNG VLRLPPGFRF HPTDEELVVQ YLKRKVHSYP LPASIIPEVE VCKSDPWDLP 60 GDLEQERYFF STREAKYPNG NRSNRATGSG YWKATGIDKQ IVTSRGNHVV GMKKTLVFYR 120 GKPPQGTRTD WIMHEYRLVA PTNPQTKATP ENKSLPQNHV IVAPIDSWVL CRIFLKKRGS 180 KNDDENLQTG VDHTVVRKPK STTRPVFYDF MTKEKKRADL NLAPTSSSSG SSGVTQVSSN 240 ESEEHEESSS CNSLPYFRRK QQQQ*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 9e-54 | 12 | 181 | 15 | 170 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 9e-54 | 12 | 181 | 15 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 9e-54 | 12 | 181 | 15 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 9e-54 | 12 | 181 | 15 | 170 | NO APICAL MERISTEM PROTEIN |
3swm_A | 7e-54 | 12 | 181 | 18 | 173 | NAC domain-containing protein 19 |
3swm_B | 7e-54 | 12 | 181 | 18 | 173 | NAC domain-containing protein 19 |
3swm_C | 7e-54 | 12 | 181 | 18 | 173 | NAC domain-containing protein 19 |
3swm_D | 7e-54 | 12 | 181 | 18 | 173 | NAC domain-containing protein 19 |
3swp_A | 7e-54 | 12 | 181 | 18 | 173 | NAC domain-containing protein 19 |
3swp_B | 7e-54 | 12 | 181 | 18 | 173 | NAC domain-containing protein 19 |
3swp_C | 7e-54 | 12 | 181 | 18 | 173 | NAC domain-containing protein 19 |
3swp_D | 7e-54 | 12 | 181 | 18 | 173 | NAC domain-containing protein 19 |
4dul_A | 9e-54 | 12 | 181 | 15 | 170 | NAC domain-containing protein 19 |
4dul_B | 9e-54 | 12 | 181 | 15 | 170 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Transcriptional repressor that negatively regulates the expression of genes involved in xylem vessel formation. Represses the transcriptional activation activity of NAC030/VND7, which regulates protoxylem vessel differentiation by promoting immature xylem vessel-specific genes expression (PubMed:20388856). Transcriptional activator that regulates the COLD-REGULATED (COR15A and COR15B) and RESPONSIVE TO DEHYDRATION (LTI78/RD29A and LTI65/RD29B) genes by binding directly to their promoters. Mediates signaling crosstalk between salt stress response and leaf aging process (PubMed:21673078). May play a role in DNA replication of mungbean yellow mosaic virus (PubMed:24442717). {ECO:0000269|PubMed:20388856, ECO:0000269|PubMed:21673078, ECO:0000269|PubMed:24442717}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By abscisic acid (ABA) and salt stress. {ECO:0000269|PubMed:21673078}. |