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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
HL.SW.v1.0.G015043.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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| Family |
WRKY |
| Protein Properties |
Length: 599aa MW: 65259.1 Da PI: 7.142 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| HL.SW.v1.0.G015043.1 | genome | HOPBASE | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 105.6 | 2.6e-33 | 246 | 303 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d++++ei+Y+g+Hnh+k
HL.SW.v1.0.G015043.1 246 DDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSL-DGQITEIVYKGSHNHPK 303
8****************************************.***************85 PP
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| 2 | WRKY | 105.9 | 2.1e-33 | 423 | 481 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+vkg+++prsYY+Ct +gCpv+k+ver+++d ++v++tYeg+Hnhe
HL.SW.v1.0.G015043.1 423 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCPVRKHVERASHDLRAVITTYEGKHNHE 481
59********************************************************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009409 | Biological Process | response to cold |
| GO:0009414 | Biological Process | response to water deprivation |
| GO:0009651 | Biological Process | response to salt stress |
| GO:0009753 | Biological Process | response to jasmonic acid |
| GO:0009788 | Biological Process | negative regulation of abscisic acid-activated signaling pathway |
| GO:0009938 | Biological Process | negative regulation of gibberellic acid mediated signaling pathway |
| GO:0010120 | Biological Process | camalexin biosynthetic process |
| GO:0010200 | Biological Process | response to chitin |
| GO:0010508 | Biological Process | positive regulation of autophagy |
| GO:0042742 | Biological Process | defense response to bacterium |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0050832 | Biological Process | defense response to fungus |
| GO:0070370 | Biological Process | cellular heat acclimation |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 599 aa
Download sequence Send
to blast |
MASSSGSLDT SANSFPNFTF SAHPFMTTSF SDLLSSGTEE EPIAAAAADD SRRGLSDRIA 60
ERTGWGVPKF KSLPPPSLPI SPPSVSPSSY FAIPAGLSPA ELLDSPVLLN SSNILPSPTT 120
GRFASQVSSW KNSYGDNQQS VKQEQKNYSD FSFQTQTRPP TSSSSMFLPS HTTAQTAWTN 180
SFQEPTKQQN EYSSGKSTTK PEFASAQSFS SEIKSNNSVQ TNGGFQSEYS NNNYPQQAQA 240
LSRRSDDGYN WRKYGQKQVK GSENPRSYYK CTYPNCPTKK KVERSLDGQI TEIVYKGSHN 300
HPKPQATRRS SSSSSAAAPP AAALIQTSNL SNSEIPDQSY VSQGNGQMDS ATTPENSSIS 360
IGDEDFEQSS QKTKSGGDDL DEDEPDAKRW KREGENEGIS APGSRTVREP RVVVQTTSDI 420
DILDDGYRWR KYGQKVVKGN PNPRSYYKCT NPGCPVRKHV ERASHDLRAV ITTYEGKHNH 480
EVPAARGSGG HSINRPLPSS NNNAVASIRP SAMAPHNMTN HNTNNNHLQN LTLPTSSEGQ 540
LPFTLEMLQS PGSYGFSGFG NSGTSSYMTQ SQLTDNVVYT KTKEEPRDDN TFLESLLC*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription repressor (By similarity). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Negative regulator of both gibberellic acid (GA) and abscisic acid (ABA) signaling in aleurone cells, probably by interfering with GAM1, via the specific repression of GA- and ABA-induced promoters (By similarity). {ECO:0000250|UniProtKB:Q6IEQ7, ECO:0000250|UniProtKB:Q6QHD1}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by abscisic acid (ABA) in aleurone cells, embryos, roots and leaves (PubMed:25110688). Slightly down-regulated by gibberellic acid (GA) (By similarity). Accumulates in response to jasmonic acid (MeJA) (PubMed:16919842). {ECO:0000250|UniProtKB:Q6IEQ7, ECO:0000269|PubMed:16919842, ECO:0000269|PubMed:25110688}. |
