![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
HL.SW.v1.0.G014904.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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Family |
AP2 |
Protein Properties |
Length: 540aa MW: 58791.3 Da PI: 7.8461 |
Description |
AP2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
HL.SW.v1.0.G014904.1 | genome | HOPBASE | View CDS |
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Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Hlu&pid=HL.SW.v1.0.G014904.1) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 53.3 | 7e-17 | 191 | 240 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g
HL.SW.v1.0.G014904.1 191 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 240
78*******************......55************************997 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 540 aa
Download sequence Send
to blast |
MLDLNVNINM GADSTYEKIE GGAEMMIMEV SEKLQERSRT QMEDSGSSGS SVVNVEIEAL 60 SSTTTITTPS KGAFREEDSS INIMSTSSSA FIFDILKREK DCHIGATPGK ESNTSDPGFL 120 TRSFFPVAGE KGGNQYLEAG SGSSSSRPQW LNLSFADSGG GGGTQPPADV KILQQKQQIK 180 KSRRGPRSRS SQYRGVTFYR RTGRWESHIW DCGKQVYLGG FDTAHAAARA YDRAAIKFRG 240 VDADINFNVT DYDEDMMQMK NLSKEEFVQI LRRQSTGFSR GSSKYRGVTL HKCGRWEARM 300 GQFLGKKAYD KAAIKCNGRE AVTNFEHSTY QGEIILDSNA QGGSDHNLDL NLGISPPCDG 360 PKGHEYSFGF GDTRVHWNPR EGPNRIRPTM LLIISTHDSQ QIDGQSSPHI LPPNHTASAT 420 CSGVYPGFLP KHEEMRAMAD DHQKRIAAAN SSQGFLNWAW KIHGNGSNAT SSSCVAMPVF 480 SIAASSGFSS STSLAALSAT NTINPQANFV QNICLSPSLP ITTTNSVTDN FHSSQIHRG*
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Regulates negatively the transition to flowering time and confers flowering time delay. {ECO:0000250, ECO:0000269|PubMed:14555699}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Repressed by miR172a-2/EAT. {ECO:0000269|PubMed:14555699}. |