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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | HL.SW.v1.0.G014047.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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Family | bZIP | ||||||||
Protein Properties | Length: 202aa MW: 22376.4 Da PI: 8.191 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 56.1 | 8.1e-18 | 58 | 118 | 3 | 63 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++kr rr+ +NRe+ArrsR+RK+a ++ Le v++L +eN++L k+l + ++ + ++++ HL.SW.v1.0.G014047.1 58 DVKRIRRMVSNRESARRSRRRKQAHLADLEIQVEQLRGENSSLYKQLTDASHQCREADTDN 118 68********************************************999999998877665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 8.0E-17 | 56 | 120 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.978 | 58 | 110 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 6.4E-15 | 58 | 112 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.53E-12 | 60 | 110 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.2E-9 | 60 | 97 | No hit | No description |
CDD | cd14702 | 3.91E-7 | 61 | 112 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 63 | 78 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.10 | 1.6E-4 | 98 | 127 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0071333 | Biological Process | cellular response to glucose stimulus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence Send to blast |
MKRERISVGS PISASNNPKG RDEQAIGATS GSSHEQSDDD IDIEAGPCEQ STDGINHDVK 60 RIRRMVSNRE SARRSRRRKQ AHLADLEIQV EQLRGENSSL YKQLTDASHQ CREADTDNRV 120 LKSDVEAMRA RVKLAETSNL NQLIQSHLNT TTSAASILAH FNTTTNSSSS TTTSNKNNPP 180 NVSPTITVHG NSNHHHHHCH HH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 72 | 79 | RRSRRRKQ |
2 | 74 | 79 | SRRRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that binds to the DNA specific sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters. {ECO:0000269|PubMed:11133985}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010112149.1 | 3e-61 | basic leucine zipper 9 isoform X1 | ||||
Refseq | XP_024031675.1 | 3e-61 | basic leucine zipper 9 isoform X2 | ||||
Swissprot | Q6H500 | 9e-48 | RSBZ4_ORYSJ; bZIP transcription factor RISBZ4 | ||||
TrEMBL | A0A2P5DT35 | 1e-78 | A0A2P5DT35_PARAD; Basic-leucine zipper transcription factor | ||||
STRING | XP_010112149.1 | 1e-60 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4195 | 34 | 58 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G24800.1 | 1e-36 | basic leucine zipper 9 |
Publications ? help Back to Top | |||
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