PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus

Family

BES1

Protein Properties

Length: 677aa MW: 75682.8 Da PI: 6.1877

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
HL.SW.v1.0.G010969.1	genome	HOPBASE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	136.2	3.4e-42	78	217	1	131
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasas 89 gg++r ++ +E+E++k+RER+RRai+aki+aGLR++G y+l++raD+n+V++AL+reAGwvv +DGtt++ s+p+ + +ag +++ HL.SW.v1.0.G010969.1 78 GGARRCRPLEEKERTKLRERHRRAITAKILAGLRRHGSYNLRVRADINDVIAALAREAGWVVLPDGTTFPSRSQPQGS-RHAGVNSTVA 165 6899******************************************************************99999933.3333333333 PP DUF822 90 pesslq..........sslkssalaspvesysaspksssfpspssldsisla 131 ++ss + ++ + +s v+ ++++k + +p +s +d ++a HL.SW.v1.0.G010969.1 166 TSSSGHtapqqtapssLRGGAAGYQSSVDYNANRMKGVYMPCSSPYDISTSA 217 3333220010000001333344566777777777777777777777766555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.4E-37	80	205	IPR008540	BES1/BZR1 plant transcription factor, N-terminal
SuperFamily	SSF51445	2.26E-178	245	671	IPR017853	Glycoside hydrolase superfamily
Gene3D	G3DSA:3.20.20.80	1.9E-196	250	672	IPR013781	Glycoside hydrolase, catalytic domain
Pfam	PF01373	8.3E-103	264	665	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	2.7E-71	276	290	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	2.7E-71	297	315	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	2.7E-71	319	340	IPR001554	Glycoside hydrolase, family 14
PROSITE pattern	PS00506	0	323	331	IPR018238	Glycoside hydrolase, family 14, conserved site
PRINTS	PR00842	3.9E-7	402	411	IPR001371	Glycoside hydrolase, family 14B, plant
PRINTS	PR00750	2.7E-71	412	434	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	2.7E-71	485	504	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	2.7E-71	519	535	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	2.7E-71	536	547	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	2.7E-71	554	577	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00842	3.9E-7	557	567	IPR001371	Glycoside hydrolase, family 14B, plant
PRINTS	PR00750	2.7E-71	594	616	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00842	3.9E-7	645	659	IPR001371	Glycoside hydrolase, family 14B, plant
PRINTS	PR00842	3.9E-7	660	674	IPR001371	Glycoside hydrolase, family 14B, plant

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0000272	Biological Process	polysaccharide catabolic process
GO:0048831	Biological Process	regulation of shoot system development
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0016161	Molecular Function	beta-amylase activity

Sequence ? help Back to Top
Protein Sequence Length: 677 aa Download sequence Send to blast
MASEMHKLIG TSEEDDEEEM EMDVKEEDGD DEDRRKHAAA SASVMVGFDG GMPTSSSNNN 60 HQFQQLQQVQ EVSTPGGGGA RRCRPLEEKE RTKLRERHRR AITAKILAGL RRHGSYNLRV 120 RADINDVIAA LAREAGWVVL PDGTTFPSRS QPQGSRHAGV NSTVATSSSG HTAPQQTAPS 180 SLRGGAAGYQ SSVDYNANRM KGVYMPCSSP YDISTSARSQ TSTMVGDGGE QSESQPHIVG 240 SIDTIDDKQL GVVNMKCELV DPDGLLKQLR VLKSVNVDGV AVDCWWGIVE AHAPQEYNWN 300 GYKRLFQMVR ELKLKLQVMM SFHECGGNVG DDVCIPLPHW VAEIGRNNPD IFFTDREGRR 360 NPECLSWGID KERVLRGRTA VEVYFDYMRS FRIEFNEFFE EGIISMILVG LGPCGELRYP 420 SCPVKHGWRY PGIGEFQCYD QYLLKSLRKA ADARGHSFWA RGPDNAGSYN SQPHETGFFC 480 DGGDYDGYYG RFFLNWYSKV LVDHGERVLS LAKLAFEGTC IAAKLSGIHW WYKTASHAAE 540 LTAGFYNSCN RDGYAAIMSM LSKHGAALNF TCAELHMLNH HEDFQEALAD PEGLVWQVLN 600 AAWDVCIPVA NENAFPCHDQ VGYNKILDDA KPSSDPDRRH FSSFTYLRVS PHLMERHNFV 660 EFEQFVKKMH GESIRV*

Sequence ? help Back to Top

Protein Sequence Length: 677 aa Download sequence Send to blast

MASEMHKLIG TSEEDDEEEM EMDVKEEDGD DEDRRKHAAA SASVMVGFDG GMPTSSSNNN  60
HQFQQLQQVQ EVSTPGGGGA RRCRPLEEKE RTKLRERHRR AITAKILAGL RRHGSYNLRV  120
RADINDVIAA LAREAGWVVL PDGTTFPSRS QPQGSRHAGV NSTVATSSSG HTAPQQTAPS  180
SLRGGAAGYQ SSVDYNANRM KGVYMPCSSP YDISTSARSQ TSTMVGDGGE QSESQPHIVG  240
SIDTIDDKQL GVVNMKCELV DPDGLLKQLR VLKSVNVDGV AVDCWWGIVE AHAPQEYNWN  300
GYKRLFQMVR ELKLKLQVMM SFHECGGNVG DDVCIPLPHW VAEIGRNNPD IFFTDREGRR  360
NPECLSWGID KERVLRGRTA VEVYFDYMRS FRIEFNEFFE EGIISMILVG LGPCGELRYP  420
SCPVKHGWRY PGIGEFQCYD QYLLKSLRKA ADARGHSFWA RGPDNAGSYN SQPHETGFFC  480
DGGDYDGYYG RFFLNWYSKV LVDHGERVLS LAKLAFEGTC IAAKLSGIHW WYKTASHAAE  540
LTAGFYNSCN RDGYAAIMSM LSKHGAALNF TCAELHMLNH HEDFQEALAD PEGLVWQVLN  600
AAWDVCIPVA NENAFPCHDQ VGYNKILDDA KPSSDPDRRH FSSFTYLRVS PHLMERHNFV  660
EFEQFVKKMH GESIRV*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1q6e_A	1e-147	250	672	20	444	beta-amylase
1q6f_A	1e-147	250	672	20	444	beta-amylase
1ukp_A	1e-147	250	672	20	444	Beta-amylase
1ukp_B	1e-147	250	672	20	444	Beta-amylase
1ukp_C	1e-147	250	672	20	444	Beta-amylase
1ukp_D	1e-147	250	672	20	444	Beta-amylase
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010105937.1	0.0	beta-amylase 7
Swissprot	O80831	0.0	BAM7_ARATH; Beta-amylase 7
TrEMBL	A0A2P5F2Q7	0.0	A0A2P5F2Q7_TREOI; Beta-amylase
STRING	XP_010105937.1	0.0	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF10883	33	39

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45880.1	0.0	beta-amylase 7

Publications ? help Back to Top
Soyk S, et al. The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation. Plant Cell, 2014. 26(4): p. 1746-1763 [PMID:24748042]