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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
HL.SW.v1.0.G010668.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 135aa MW: 16019.2 Da PI: 10.0105 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| HL.SW.v1.0.G010668.1 | genome | HOPBASE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 64.2 | 1.9e-20 | 55 | 107 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
++++++eq++ Le Fe+++++ e++ +LA++lgL+ rqV vWFqNrRa++k
HL.SW.v1.0.G010668.1 55 KRKLSEEQVNLLEMNFESEHKLESERKDRLASELGLDPRQVAVWFQNRRARWK 107
4589************************************************9 PP
|
| 2 | HD-ZIP_I/II | 118.1 | 4.9e-38 | 54 | 135 | 2 | 83 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLeke 83
+kr+ls+eqv+lLE++Fe+e+kLe+erK +la+eLgl+prqvavWFqnrRAR+ktk+lE++y++Lk+ +d+++++++rLe+e
HL.SW.v1.0.G010668.1 54 RKRKLSEEQVNLLEMNFESEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKTKKLEEEYSSLKKLHDSVVHDKCRLESE 135
8******************************************************************************976 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 135 aa
Download sequence Send
to blast |
MTSTMNNQVE DHMVLYTQLY PGVYPQMAPQ QGETKAKRRR KKNKSAKEES ALARKRKLSE 60
EQVNLLEMNF ESEHKLESER KDRLASELGL DPRQVAVWFQ NRRARWKTKK LEEEYSSLKK 120
LHDSVVHDKC RLESE
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 37 | 55 | RRRKKNKSAKEESALARKR |
| 2 | 39 | 56 | RKKNKSAKEESALARKRK |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By abscisic acid (ABA) and by salt stress. {ECO:0000269|PubMed:16055682}. |
