|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
HL.SW.v1.0.G010657.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
|
Family |
NAC |
Protein Properties |
Length: 389aa MW: 43705.5 Da PI: 6.7983 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
HL.SW.v1.0.G010657.1 | genome | HOPBASE | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 174.3 | 3.5e-54 | 10 | 135 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89
lppGfrFhPtdeel+++yL +k++++ ++ ++++ vd++k+ePwdLp+k++ +ekewyfFs +d+ky+tg r+nrat++gyWk+tgkd
HL.SW.v1.0.G010657.1 10 LPPGFRFHPTDEELITYYLGRKISDSGFTP-KAVAVVDLNKCEPWDLPEKASMGEKEWYFFSLKDRKYPTGLRTNRATEAGYWKTTGKD 97
79*************************998.78***************999999*********************************** PP
NAM 90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
ke+l+ +g lvg+kktLvfykgrap+gek++Wvmheyrl
HL.SW.v1.0.G010657.1 98 KEILR-SGVLVGMKKTLVFYKGRAPRGEKSNWVMHEYRL 135
****9.999****************************98 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 389 aa
Download sequence Send
to blast |
MAMAMGIEEL PPGFRFHPTD EELITYYLGR KISDSGFTPK AVAVVDLNKC EPWDLPEKAS 60 MGEKEWYFFS LKDRKYPTGL RTNRATEAGY WKTTGKDKEI LRSGVLVGMK KTLVFYKGRA 120 PRGEKSNWVM HEYRLQNNHP FNHPNKEEWV VCRVFQKSSG LKKPQQTPSS HEPSIESPCD 180 DTNSIANNNE FGDFDIMPNL NINNNHSNNL STQLGFMMNS GSSNNNLMNN NMMMNLNNMN 240 YWTNNNSTTA NGTTSTSTSS PLLPSLSSWH NSNLLNPNLS MNSFILKALQ LRNSASNNID 300 QNYNNPYMPQ QGISHHHHHQ FGSDILGSTA TSNGFHLASS SSSLLLSKMN NNNNNSNIII 360 DSTSQVQQQE QPFSLDSIGE DDDHHVLF*
|
3D Structure ? help Back to Top |
|
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 2e-56 | 5 | 163 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-56 | 5 | 163 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-56 | 5 | 163 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-56 | 5 | 163 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-56 | 5 | 163 | 7 | 174 | NAC domain-containing protein 19 |
3swm_B | 2e-56 | 5 | 163 | 7 | 174 | NAC domain-containing protein 19 |
3swm_C | 2e-56 | 5 | 163 | 7 | 174 | NAC domain-containing protein 19 |
3swm_D | 2e-56 | 5 | 163 | 7 | 174 | NAC domain-containing protein 19 |
3swp_A | 2e-56 | 5 | 163 | 7 | 174 | NAC domain-containing protein 19 |
3swp_B | 2e-56 | 5 | 163 | 7 | 174 | NAC domain-containing protein 19 |
3swp_C | 2e-56 | 5 | 163 | 7 | 174 | NAC domain-containing protein 19 |
3swp_D | 2e-56 | 5 | 163 | 7 | 174 | NAC domain-containing protein 19 |
4dul_A | 2e-56 | 5 | 163 | 4 | 171 | NAC domain-containing protein 19 |
4dul_B | 2e-56 | 5 | 163 | 4 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |