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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
HL.SW.v1.0.G008728.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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| Family |
BES1 |
| Protein Properties |
Length: 324aa MW: 34872.7 Da PI: 8.3896 |
| Description |
BES1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| HL.SW.v1.0.G008728.1 | genome | HOPBASE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF822 | 217.3 | 3.6e-67 | 2 | 148 | 1 | 149 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasas 89
++++r+ptwkErEnnkrRERrRRaiaakiy+GLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+++++++g s+sas
HL.SW.v1.0.G008728.1 2 TSGTRMPTWKERENNKRRERRRRAIAAKIYSGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPMDRMDIMGGSTSAS 90
5899************************************************************************************* PP
DUF822 90 pesslqsslkssalaspvesysaspksssfpspssldsislasa......asllpvlsvlslvsss 149
p+ss+q +sp++sy++sp++ssfpsp+s+ + + ++ +sl+p+l++l++ sss
HL.SW.v1.0.G008728.1 91 PCSSYQ--------PSPCASYNPSPATSSFPSPVSSHYTANVNSnnnadpNSLIPWLKTLTSGSSS 148
******........888888888888888888877665444333356777********99887766 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 324 aa
Download sequence Send
to blast |
MTSGTRMPTW KERENNKRRE RRRRAIAAKI YSGLRMYGNY KLPKHCDNNE VLKALCNEAG 60
WTVEEDGTTY RKGCKPMDRM DIMGGSTSAS PCSSYQPSPC ASYNPSPATS SFPSPVSSHY 120
TANVNSNNNA DPNSLIPWLK TLTSGSSSAT SKFPHHLFIH SGSISAPVTP PLSSPTCRTP 180
RNKNEWDDPM VASQNNPFQP SSNPQSPGRQ VLPDSNWLAG IQSGPSSPTF SLVSRNPFGF 240
KDEALSNGGS RMWTPGQSGT CSPAIAAGLD NTSDIPMSDG NIAGAEFAFG SNTTGLVKPW 300
KGERIEECVS DDLELTLGNA TTR*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5zd4_A | 6e-25 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_B | 6e-25 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_C | 6e-25 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_D | 6e-25 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
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