 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
HL.SW.v1.0.G006533.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
|
| Family |
GRAS |
| Protein Properties |
Length: 286aa MW: 33395.6 Da PI: 8.768 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| HL.SW.v1.0.G006533.1 | genome | HOPBASE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 290.5 | 4.6e-89 | 2 | 282 | 94 | 373 |
GRAS 94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnv 180
+ l aN+ I++ +e+++++Hi+Df+i +G+QWp +++ L++ p+gpp+lRiTg++ p+ g ke++eetg+rLa+++e++gv f++n+
HL.SW.v1.0.G006533.1 2 AMLFANKSIMQVAEKATTLHIVDFGILYGFQWPIFIERLSKMPGGPPNLRITGIEFPQDGfrPKERVEETGRRLAEYCERFGVAFRYNA 90
5689******************************************************99***************************** PP
GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfd 269
+++k++e++++ee++++++E++aVn++++l+++ +esv+ r++vL+l+++++P ++v + + ++n++ F++rf eal +ysalfd
HL.SW.v1.0.G006533.1 91 IATKNWESIRVEEIEIESNEVVAVNCMMRLKHIIEESVENCP-RNAVLSLIRKMNPAIFVNSIVNGSYNAPFFVTRFREALFHYSALFD 178
**********************************88888777.********************************************** PP
GRAS 270 sleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgsl 358
+l+a+++re++ r+ +Ere++greivnv+aceg++r+er et+++W+ r ++ GF++ pl+ +++++ k lr+ + + + ++++s+++
HL.SW.v1.0.G006533.1 179 MLDATVGRENQVRVLYEREIFGREIVNVIACEGEKRVERPETYKQWHVRCSRTGFRSRPLDREIMSKFKEKLRTWYHKDFVIDQDSNWM 267
****************************************************************************888********** PP
GRAS 359 vlgWkdrpLvsvSaW 373
++gWk+r ++ S+W
HL.SW.v1.0.G006533.1 268 LQGWKGRIAYASSCW 282
*************** PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 286 aa
Download sequence Send
to blast |
MAMLFANKSI MQVAEKATTL HIVDFGILYG FQWPIFIERL SKMPGGPPNL RITGIEFPQD 60
GFRPKERVEE TGRRLAEYCE RFGVAFRYNA IATKNWESIR VEEIEIESNE VVAVNCMMRL 120
KHIIEESVEN CPRNAVLSLI RKMNPAIFVN SIVNGSYNAP FFVTRFREAL FHYSALFDML 180
DATVGRENQV RVLYEREIFG REIVNVIACE GEKRVERPET YKQWHVRCSR TGFRSRPLDR 240
EIMSKFKEKL RTWYHKDFVI DQDSNWMLQG WKGRIAYASS CWLPA*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
