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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
HL.SW.v1.0.G005837.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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| Family |
HD-ZIP |
| Protein Properties |
Length: 180aa MW: 21469.8 Da PI: 6.2779 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| HL.SW.v1.0.G005837.1 | genome | HOPBASE | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 53.2 | 5e-17 | 3 | 55 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
++++++eq+++Le+ F ++++ e++ LA++lg++ rqV vW+qN+Ra+++
HL.SW.v1.0.G005837.1 3 KRRLNEEQVRVLERNFLYEKKLEPEHKHLLADQLGIPARQVAVWYQNKRARWR 55
45799***********************************************9 PP
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| 2 | HD-ZIP_I/II | 104.2 | 1.1e-33 | 2 | 92 | 2 | 92 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
+krrl++eqv++LE++F e+kLepe+K+ la +Lg+ +rqvavW+qn+RAR++t++lE+d+ +L++++d+ +e++rL++e Lr el+
HL.SW.v1.0.G005837.1 2 NKRRLNEEQVRVLERNFLYEKKLEPEHKHLLADQLGIPARQVAVWYQNKRARWRTQNLEVDCITLQHRLDTALAEKRRLQREILMLRGELD 92
69************************************************************************************99886 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 180 aa
Download sequence Send
to blast |
MNKRRLNEEQ VRVLERNFLY EKKLEPEHKH LLADQLGIPA RQVAVWYQNK RARWRTQNLE 60
VDCITLQHRL DTALAEKRRL QREILMLRGE LDMARQALQL TNNNTNTIYY DNNIHNNNNV 120
VSSYCTTDQE QGDGRSCSSF YDNPQYEHVI NDYDHHHLDH HDDQALLIDH DFFSNLIDW*
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