 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
HL.SW.v1.0.G005483.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
|
| Family |
WRKY |
| Protein Properties |
Length: 359aa MW: 40061.3 Da PI: 10.367 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| HL.SW.v1.0.G005483.1 | genome | HOPBASE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 98.4 | 4.6e-31 | 292 | 349 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D ++WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ ed +++++tYegeHnh+
HL.SW.v1.0.G005483.1 292 DDFSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEDSSMLIVTYEGEHNHP 349
99***********************9988****************************8 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0005516 | Molecular Function | calmodulin binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 359 aa
Download sequence Send
to blast |
MEEVEEANKA AVESCHRVLN LLSQPQDQVQ RRNLVVETGE AVVRFKRVVS LLNTGLGHAR 60
VRKVKKLPIP LPQNILLDNP NCRTDRPSKT SHFLQSSIPE NPLHDMGSNV KSSLCLGNTS 120
LELSSGGKTP IQLAQQGTPA HYRLLQQQQQ QHQQQQQQQQ QQQKLLFQQH QQQMKHQAEM 180
MFRKSNSGIS LNFDSSSCTP TMSSTRSFIS SLSMDGSVAN LDGNSFHLIG APRSSDQTSQ 240
HKRKCSARGD DGSVKCGSSG GRCHCSKKRK HRVKRSIKVP AISNKLADIP PDDFSWRKYG 300
QKPIKGSPHP RGYYKCSSMR GCPARKHVER CLEDSSMLIV TYEGEHNHPR IQSQSANN*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By salicylic acid. {ECO:0000269|PubMed:11449049}. |
