 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
HL.SW.v1.0.G004978.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
|
| Family |
GRF |
| Protein Properties |
Length: 408aa MW: 45600.7 Da PI: 10.1839 |
| Description |
GRF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| HL.SW.v1.0.G004978.1 | genome | HOPBASE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRC | 72.4 | 5.1e-23 | 104 | 146 | 2 | 44 |
WRC 2 aepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44
+ep+rCrRtDGKkWRCs+++l+ +k+CErH+hrgr+rsrk ++
HL.SW.v1.0.G004978.1 104 NEPWRCRRTDGKKWRCSKEALPHQKYCERHIHRGRHRSRKLVD 146
79**************************************987 PP
|
| 2 | WRC | 72.4 | 5.1e-23 | 312 | 354 | 2 | 44 |
WRC 2 aepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44
+ep+rCrRtDGKkWRCs+++l+ +k+CErH+hrgr+rsrk ++
HL.SW.v1.0.G004978.1 312 NEPWRCRRTDGKKWRCSKEALPHQKYCERHIHRGRHRSRKLVD 354
79**************************************987 PP
|
| 3 | QLQ | 37.1 | 9.3e-14 | 41 | 74 | 3 | 36 |
QLQ 3 FTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36
FT Ql++L Q l+yKy+ a++PvP +L+q+i+
HL.SW.v1.0.G004978.1 41 FTILQLHELQLQTLIYKYIEAGLPVPYNLVQPIW 74
7778*****************************9 PP
|
| 4 | QLQ | 37.1 | 9.3e-14 | 249 | 282 | 3 | 36 |
QLQ 3 FTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36
FT Ql++L Q l+yKy+ a++PvP +L+q+i+
HL.SW.v1.0.G004978.1 249 FTILQLHELQLQTLIYKYIEAGLPVPYNLVQPIW 282
7778*****************************9 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 408 aa
Download sequence Send
to blast |
MAHFTSSGFG QEEGSSQIGL NLELGRGVCQ NKRSSSSYHG FTILQLHELQ LQTLIYKYIE 60
AGLPVPYNLV QPIWQSFSSS ITGLNNGLGV VGPLCLDSRR GMENEPWRCR RTDGKKWRCS 120
KEALPHQKYC ERHIHRGRHR SRKLVDSCNS KTTTMANTST SNNGGGGIGS TMTDLSISLH 180
VNENNTRGFI FPRNGIGKLF LKYKISFATK NFLVKRFGQE EGSSQIGLNL ELGRGVCQNK 240
RSSSSYHGFT ILQLHELQLQ TLIYKYIEAG LPVPYNLVQP IWQSFSSSIT GLNNGLGVVG 300
PLCLDSRRGM ENEPWRCRRT DGKKWRCSKE ALPHQKYCER HIHRGRHRSR KLVDSCNSKT 360
TTMANTSTSN NGGGGIGSTM TDLSISLHVN ENNTRGFLFP RLDFQPN*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription activator that plays a regulatory role in gibberellin-induced stem elongation. {ECO:0000250}. |
