 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
HL.SW.v1.0.G004955.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
|
| Family |
LBD |
| Protein Properties |
Length: 240aa MW: 25882.6 Da PI: 8.676 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| HL.SW.v1.0.G004955.1 | genome | HOPBASE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 98 | 9.6e-31 | 2 | 103 | 1 | 97 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklq 84
+C++C+vlr++C+++C+l+p++ +++q +++ +v+k+FG++ ++++++a+pe++r+++++sl++eA+ r+ +Pv+Gavg++++++
HL.SW.v1.0.G004955.1 2 SCNGCRVLRKGCSESCILRPCLqwietAEAQGHATVFVAKFFGRAGLMSFISAVPESQRPALFQSLLFEACGRTVNPVNGAVGLLWTGN 90
6*********************9999777889********************************************************* PP
DUF260 85 qqleqlkaelall 97
++++q+++e++l+
HL.SW.v1.0.G004955.1 91 WHMCQAAVETVLR 103
*******998876 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 240 aa
Download sequence Send
to blast |
MSCNGCRVLR KGCSESCILR PCLQWIETAE AQGHATVFVA KFFGRAGLMS FISAVPESQR 60
PALFQSLLFE ACGRTVNPVN GAVGLLWTGN WHMCQAAVET VLRGGTLRPL PELLGSGVGA 120
MTTTPTAASD EASEAEVTCT DIWKVRDPNS GSRFSTSRSR LSPKRKRSDS PAKLRNTADL 180
DLRLTPIFPG KPTARKADVR RPLSPSMNSE ESETTTCFDS GLADQNVIGG DRKLLNLFF*
|
