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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
HL.SW.v1.0.G004113.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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| Family |
WRKY |
| Protein Properties |
Length: 399aa MW: 44338.1 Da PI: 5.8762 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| HL.SW.v1.0.G004113.1 | genome | HOPBASE | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 96.1 | 2.3e-30 | 206 | 264 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+vers++dp+ +++tY+g+H+h+
HL.SW.v1.0.G004113.1 206 TDLWAWRKYGQKPIKGSPYPRNYYRCSSSkGCAARKQVERSNTDPESFVVTYTGDHTHP 264
699************************998****************************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0007263 | Biological Process | nitric oxide mediated signal transduction |
| GO:0009739 | Biological Process | response to gibberellin |
| GO:0042742 | Biological Process | defense response to bacterium |
| GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 399 aa
Download sequence Send
to blast |
MKGGQTTSSS EDTLSCLASL TFEEENDPFS FPNLVAEPRT NTFEELQQFY KPFFSNNSPT 60
TITGTTTTTA QGIIPNSPIS DFGGSSGQHL LHYQEQHHQQ QQQHLGTPND AAVRPQFMHP 120
QPYISGFGRL HGRRQYQLRE LDRNNQVPVL LLKPDHRAKA TTPTTTLPLP PFQLPTMPIS 180
HTPRSRKRKN QQKKMVCHVS AENLSTDLWA WRKYGQKPIK GSPYPRNYYR CSSSKGCAAR 240
KQVERSNTDP ESFVVTYTGD HTHPRPTHRN SLAGSTRNKL SPPPNITAIT KKDIMGSDHS 300
PSPTQSTSKL SPTTQLTVAQ TEEYAAAKLQ LEENESGEGD GGEKQSDDIL LEEELMDLDE 360
NEEDEDDDDD VLIPNMSLSE DFFLGLKELG CSPPGAAC*
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